1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgcactctgtccaatgggtattcatatcctagagagattgcaaatgtctatggattgtacttactacagcattcatatttctattctaatgatgtttgtcccttcatttgtaccgtgcagATAGCATTTCAGCGGCAGATGTCAGCCTAACTCGAAACATGTCATATTTCCGGCGTGTTAATTCCAATGGCATTCCTAAAATCACTTACTTACACCTTTA
species | Oryza sativa |
transcript | LOC_Os01g09030.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: GGCCAAGCTTGCTGCATGTGTTAGACCTTCGTATATTACAG ATAGCATTTCAGCGGCAGATGTCAGGCGAACTCGAAACATGTCATATTTCCEST: gi|27578223|gb|CB000918.1|CB000918
genomic: GGCCAAGCTTGCTGCATGTGTTAGACCTTCGTATATTACAGgtgcactctg ... taccgtgcagATAGCATTTCAGCGGCAGATGTCAGCCTAACTCGAAACATGTCATATTTCC
EST: TATCTTGTTGGCCAAGCTTGCTGCATGTGTTAGACCTTCGTATATTACAG ATAGCATTTCAGCGGCAGATGTCAGCCTAACTCGAAACATGTCATATTTCC
genomic: TATCTTGTTGGCCAAGCTTGCTGCATGTGTTAGACCTTCGTATATTACAGgtgcactctg ... taccgtgcagATAGCATTTCAGCGGCAGATGTCAGCCTAACTCGAAACATGTCATATTTCC
acagcattcatatttctattctaatgatgtttgtcccttcatttgtaccgtgcagATAGCATTTCAGCGGCAGATGTCAGCCTAACTCGAAACATGTCATATTTCCGGCGTGTTAATTCCAATGGCATTCCTAAAATCACTTACTTACACCTTTA
ttctaat putative branch site (score: 8)
atatttctattctaat TA-rich tract