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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgatgcaggatataaccaaaggacgctaaaggttcatttgtataaagcaagcatttaaaaccaaaagttgaaagcagtaaaacagttgtagtaattaatcaatattaaccaatcacagTCCAACGCTACACCACGTTGCAACAGGCCCAACCAACCACCTGAACTACACCAGTTCATTAAGCTAAACTAG

Basic information

species Oryza sativa
transcript 13114.m00122
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaagttgaaagcagtaaaacagttgtagtaattaatcaatattaaccaatcacagTCCAACGCTACACCACGTTGCAACAGGCCCAACCAACCACCTGAACTACACCAGTTCATTAAGCTAAACTAG
                                       tattaac  putative branch site (score: 1)
                      ttgtagtaattaatca  TA-rich tract