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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taatttaattaacaaaagaaaaaactgaatggcgtgttcttttttcattggtgaaattatgatgaataatattgatattttatttttctttgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCTGAATTTGGGCTTGTAGAGGGTCTTGCAGACTCGTACAACCTGGACTTTG

Basic information

species Glycine max
transcript GLYMA19G41540.2
intron # 9
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G41540.2 (Glycine max), 3'ss of exon 9
lower sequence: Vv14s0060g00820.t01 (Vitis vinifera), 3'ss of exon 9
taatttaattaacaaaagaaaaaactgaatggcgtgttcttttttcattggtgaaattatgatgaataatattgatattt-tatttttctttgttg---tgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCTGAATTTGGGCTTGTAGAGGGTCTTGCAGACTCGTACAACCTGGACTTTG
  | | || |      |     | |||      |  |  | |    |    || |    || | | | | |||   || | | |||||   || ||    |||||||||||||||||||||||||||||||||||| || ||||||||| |||| ||||| |  || || || ||||||||||| || ||||||||||| ||||
--agtcaaatcctgggattttgacctggg-actgaatcttatagctagaaatggagccttggt-attgacattttcatctgttttttttcctgatgaaccgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGCGTTCTTGGGTGGAAACCCGAATTCGACCTGGTGGAAGGTCTTGCAGATTCATACAACCTGGATTTTG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31471080|gb|CD413108.1|CD413108
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|12489505|gb|BG043027.1|BG043027
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|209707068|gb|BW653205.1|BW653205
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31456487|gb|CD398515.1|CD398515
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31306756|gb|CD391959.1|CD391959
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|105632122|gb|DW246321.1|DW246321
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTCCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31460840|gb|CD402868.1|CD402868
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|209712201|gb|BW681407.1|BW681407
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|213615004|gb|DB978381.1|DB978381
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|9258516|gb|BE346663.1|BE346663
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|18040824|gb|BM309118.1|BM309118
EST:     ATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: ATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|213604080|gb|DB984173.1|DB984173
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|120492715|gb|EH220882.1|EH220882
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31458323|gb|CD400351.1|CD400351
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|209706966|gb|BW661525.1|BW661525
EST:     CTAAAGATCTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCACTTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31561696|gb|CD487534.1|CD487534
EST:     CTNAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|7795520|gb|AW780917.1|AW780917
EST:     GAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: GAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31458290|gb|CD400318.1|CD400318
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAATCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|213606039|gb|DB980191.1|DB980191
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|120492307|gb|EH220474.1|EH220474
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|209707444|gb|BW664903.1|BW664903
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|214009625|gb|DB990274.1|DB990274
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|209723633|gb|BW682751.1|BW682751
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|14206121|gb|BG839799.1|BG839799
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|10231530|gb|BE800418.1|BE800418
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31310636|gb|CD395839.1|CD395839
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|120491996|gb|EH220163.1|EH220163
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31460394|gb|CD402362.1|CD402362
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|214008025|gb|DB986986.1|DB986986
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTTACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGTTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31472147|gb|CD414175.1|CD414175
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCCATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|9899978|gb|BE608946.1|BE608946
EST:     GGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: GGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|209719661|gb|BW669220.1|BW669220
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|14205299|gb|BG838977.1|BG838977
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTNTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|31309610|gb|CD394813.1|CD394813
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCCAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|120492078|gb|EH220245.1|EH220245
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGCAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|120492769|gb|EH220936.1|EH220936
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|120496561|gb|EH224728.1|EH224728
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|20812427|gb|BQ296905.1|BQ296905
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
EST: gi|209696687|gb|BW672891.1|BW672891
EST:     CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAG                         CATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT
genomic: CTAAAGATTTTGACTTTGGGAAAAAGAAATCATTTCCATTCCGTGACCAGgtgataaaaa ... tgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cattggtgaaattatgatgaataatattgatattttatttttctttgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCTGAATTTGGGCTTGTAGAGGGTCTTGCAGACTCGTACAACCTGGACTTTG
                        tattgat  putative branch site (score: 3)
                                ttttatttttctttgt  CT-rich tract
        aaattatgatgaataa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taatttaattaacaaaagaaaaaactgaatggcgtgttcttttttcattggtgaaattatgatgaataatattgatattttatttttctttgttgtgcagCATTTCTTTGCATCAATTGAGAAAGCAAAGAGAGTGCTTGGGTGGGAACCTGAATTTGGGCTTGTAGAGGGTCTTGCAGACTCGTACAACCTGGACTTTG

- - - - - - - -aagaaaa
- - - - - - - - - - - - ctgaatg
- - - - - - - - - - - - - - - -gcgtgtt
- - - - - - - - - - - - - - - - - - - - - - - attggtg