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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatactcaattaatcttaaactcatgctttctgactacgaattatgtgtgcaaagattaactagtatctccacagttttatgtatgctttccctttttgttttttatcacaacagGGGTTAAATCCTTTCATGTTCGTCTTCGCATTGGTTGCTAATGTCACTTACGTGGGAAG

Basic information

species Glycine max
transcript GLYMA16G25700.1
intron # 9
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51337376|gb|CO981242.1|CO981242
EST:     GAACATTAAAAGAGGCAGTGTGGAG                         GGGTTAAATCCTTTCATGTTCGTCTTCGCATTGGTTGCTAATGTCACTTAC
genomic: GAACATTAAAAGAGGCAGTGTGGAGgtaatactca ... atcacaacagGGGTTAAATCCTTTCATGTTCGTCTTCGCATTGGTTGCTAATGTCACTTAC






















 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctagtatctccacagttttatgtatgctttccctttttgttttttatcacaacagGGGTTAAATCCTTTCATGTTCGTCTTCGCATTGGTTGCTAATGTCACTTACGTGGGAAG
                        tgctttccctttttgt  CT-rich tract
                                 tttttgttttttatca  TA-rich tract