1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtccgctctcatttcataacatgactaaatattagtcttttgaattgaagatagcttctttctttctgaagagcaactactctttgcatattttctttccttattgttagattgctgattccaaaattgcagcacctccaactaattgtatatgcatttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCAC
species | Glycine max |
transcript | GLYMA16G04240.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|8284103|gb|BE021662.1|BE021662
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|16280509|gb|BI943999.1|BI943999
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|15202980|gb|BI425748.1|BI425748
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|17023962|gb|BM094996.1|BM094996
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|15814294|gb|BI786569.1|BI786569
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: GAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|22523589|gb|BU082400.1|BU082400
genomic: GAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AACTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAGCAATTGTCAGGCTTTGCCTTCEST: gi|14258702|gb|BG881610.1|BG881610
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|4288308|gb|AI441314.1|AI441314
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTEST: gi|7591269|gb|AW707005.1|AW707005
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGT
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|16105053|gb|BI892793.1|BI892793
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGCTGAGTACTTCGGTGAAACAATTG-CAGGCTTTGCCTTEST: gi|18041431|gb|BM309725.1|BM309725
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAA-CAATTGTCAGGCTTTGCCTT
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|254348827|gb|GR852506.1|GR852506
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|24135434|gb|BU925944.1|BU925944
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|4313430|gb|AI460549.1|AI460549
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|23728244|gb|BU762169.1|BU762169
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|24205191|gb|BU964444.1|BU964444
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|13251775|gb|BG362678.1|BG362678
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: TCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|193642594|gb|FK593320.1|FK593320
genomic: TCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAGATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|192333042|gb|FK024691.1|FK024691
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTCGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|17519789|gb|BM188831.1|BM188831
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|20812366|gb|BQ296844.1|BQ296844
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AACTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAGCAATTGTCAGGCTTTGCCTTCEST: gi|19348633|gb|BM893165.1|BM893165
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|192333296|gb|FK026177.1|FK026177
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGEST: gi|213615221|gb|DB965029.1|DB965029
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTG
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|14125661|gb|BG790099.1|BG790099
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|6667321|gb|AW278772.1|AW278772
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|9258931|gb|BE347078.1|BE347078
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|7640038|gb|AW734347.1|AW734347
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|21995196|gb|BQ786724.1|BQ786724
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AACTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAGCAATTGTCAGGCTTTGCCTTCEST: gi|26268981|gb|CA820044.1|CA820044
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|26048227|gb|CA784768.1|CA784768
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|21889394|gb|BQ742607.1|BQ742607
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|22522526|gb|BU081337.1|BU081337
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|254331711|gb|GR843561.1|GR843561
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|15814229|gb|BI786504.1|BI786504
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|22525578|gb|BU084389.1|BU084389
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|21888982|gb|BQ742195.1|BQ742195
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: GAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|9204626|gb|BE330850.1|BE330850
genomic: GAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|15286907|gb|BI470798.1|BI470798
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|26048073|gb|CA784670.1|CA784670
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|7588477|gb|AW704334.1|AW704334
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|13252819|gb|BG363722.1|BG363722
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACATTTGTCAGGCTTTGCCEST: gi|8283323|gb|BE020884.1|BE020884
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|9820119|gb|BE555629.1|BE555629
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|20207546|gb|BQ133635.1|BQ133635
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCEST: gi|13477481|gb|BG507350.1|BG507350
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTC
EST: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAG AGAAATGATATGGTTGAGTACTTCCGTGAACAATTTGT-AGGCTTTGCCTT
genomic: AGCTTCAAGAAGAGCTTGATATTGATGTTCTTGTTCATGGAGAACCAGAGgtccgctctc ... ttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATT-GTCAGGCTTTGCCTT
tgctgattccaaaattgcagcacctccaactaattgtatatgcatttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCAC
aactaat putative branch site (score: 2)
tttcact putative PPT
aactaattgtatat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtccgctctcatttcataacatgactaaatattagtcttttgaattgaagatagcttctttctttctgaagagcaactactctttgcatattttctttccttattgttagattgctgattccaaaattgcagcacctccaactaattgtatatgcatttcactgcagAGAAATGATATGGTTGAGTACTTCGGTGAACAATTGTCAGGCTTTGCCTTCACCGTTAATGGGTGGGTGCAATCCTATGGTTCCCGTTGCGTGAAGCCAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC