1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaacattgccaatttgccatgcttgttccttatacatcaagggaatttattgtgaaattcacttcactgagtttgttaatattcataaagttgtggatttatgttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAAG
species | Glycine max |
transcript | GLYMA14G40320.3 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|192301679|gb|FG997621.1|FG997621
genomic: CACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|298169805|gb|HO018429.1|HO018429
genomic: AGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATCTCACTGCTGAGGGTEST: gi|57574607|gb|CX547582.1|CX547582
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|8283891|gb|BE021450.1|BE021450
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|213592217|gb|DB965980.1|DB965980
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|193583665|gb|FK539323.1|FK539323
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|7233546|gb|AW568951.1|AW568951
genomic: AATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: CACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|58019806|gb|CX706548.1|CX706548
genomic: CACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|208331878|gb|GE130701.1|GE130701
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: CACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGCEST: gi|208227053|gb|GE024154.1|GE024154
genomic: CACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: TACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATEST: gi|192309871|gb|FK001415.1|FK001415
genomic: TACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCAT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|193429754|gb|FK392798.1|FK392798
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|193476836|gb|FK442637.1|FK442637
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTEST: gi|254328195|gb|GR835160.1|GR835160
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
EST: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAG GATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
genomic: AAGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGgtaacattgc ... ttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGT
tcacttcactgagtttgttaatattcataaagttgtggatttatgttttgtgcagGATTTCAGTGATGAGAAACCTTTAGCATGGAGTCATTTCACTGCTGAGGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTACCACCTAAGGCACCTCAAG
tgttaat putative branch site (score: 3)
tttgttaatattcata TA-rich tract