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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...acttaaatgcaacatgaatgccttcaagtatatgtttgttgaacaaactggagagtatgctggcctatgttcaatcataagttttttaccctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCAGCTATAATTCACTATTTTCCAAAGGCAGAAACATGTGCTGAACTTGATC

Basic information

species Glycine max
transcript GLYMA01G38410.4
intron # 9
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G38410.3 (Glycine max), 3'ss of exon 9
lower sequence: Vv04s0023g01300.t01 (Vitis vinifera), 3'ss of exon 9
------acttaaatgcaacatgaatgccttcaagtatatgtttgt--tgaacaaactggagagtatgctggcctatgttcaatcataagttttttaccctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCAGCTATAATTCACTATTTTCCAAAGGCAGAAACATGTGCTGAACTTGATC
      | ||   |    | |   |  ||||   || |  |||||  |  |  || | || || ||  ||    || |||  |     | || ||      ||| |||||||| | |||||| ||||| || |||||||| || |||||  ||||||||||||| ||||| |||| |||| | |||||||||||| ||||  | ||||
agttttatttttgttattcttctctatcttctgatagaactttgtatttcattaaatagatagcattatgtgtaatattc--ttgatggcttctt------tttgcagCATTTTAGAGGATTAAGTTTTCCTACTATTTCATCGGTTGGTCCAAATGCAGCTATCATTCATTATTCTCCAGATGCAGAAACATGTTCTGAGTTAGATC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208095753|gb|GD894541.1|GD894541
EST:     ACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATC-AAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: ACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193585459|gb|FK541140.1|FK541140
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208049790|gb|GD844997.1|GD844997
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208115878|gb|GD912229.1|GD912229
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193684357|gb|FK621857.1|FK621857
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTTCCCCCACTATTTCTTCAGTTGGCT
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTT-CCCC-ACTATTTCTTCAGTTGGCT
EST: gi|193607102|gb|FK557407.1|FK557407
EST:     GTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: GTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193433071|gb|FK398719.1|FK398719
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193710974|gb|FK644717.1|FK644717
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193603944|gb|FK559763.1|FK559763
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|254345308|gb|GR851577.1|GR851577
EST:     TTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193376901|gb|FK340536.1|FK340536
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208199048|gb|GD995019.1|GD995019
EST:     CTGGGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208286773|gb|GE083807.1|GE083807
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTTCCCCTACTTATTTCTTCAGTTGGCTCAAAT
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTT-CCCC-ACT-ATTTCTTCAGTTGGCTCAAAT
EST: gi|13480236|gb|BG509579.1|BG509579
EST:     CCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193584966|gb|FK539387.1|FK539387
EST:     TTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208276645|gb|GE074799.1|GE074799
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|207759138|gb|GD731705.1|GD731705
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACT
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACT
EST: gi|193613568|gb|FK563668.1|FK563668
EST:     TTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208159304|gb|GD953835.1|GD953835
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208245851|gb|GE050631.1|GE050631
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCT
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCT
EST: gi|208148516|gb|GD946352.1|GD946352
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193725217|gb|FK661079.1|FK661079
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208061639|gb|GD857183.1|GD857183
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|298167280|gb|HO010719.1|HO010719
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208327414|gb|GE125394.1|GE125394
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193561153|gb|FK520218.1|FK520218
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208140246|gb|GD936940.1|GD936940
EST:     TTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193407734|gb|FK372326.1|FK372326
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208277405|gb|GE081216.1|GE081216
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATCGAGTTTCCCCACTATTT
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTT
EST: gi|193545653|gb|FK502690.1|FK502690
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|23057556|gb|BU578230.1|BU578230
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208048914|gb|GD844499.1|GD844499
EST:     TGAGGTGACTGTAAGTGACCAGCTTGAAGGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TGAGGTGACTGTAAGTGACCAGCTTGAA-GGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|207777665|gb|GD746688.1|GD746688
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTTCAGTTGGCTCAAATGC
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTT-CAGTTGGCTCAAATGC
EST: gi|208067081|gb|GD866863.1|GD866863
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGNG                         CATTTCAAAGGATTGAGTTTCCCCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCA
EST: gi|193365023|gb|FK331362.1|FK331362
EST:     ACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: ACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193661816|gb|FK602658.1|FK602658
EST:     TTCGAGCATCTAAAAGTAGT                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGC
genomic: TTCGAGCATC-AAAAG-AG-gtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGC
EST: gi|193661816|gb|FK602658.1|FK602658
EST:     TTCGAGCATCTAAAAGTAGT                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGC
genomic: TTCGAGCATC-AAAAG-AG-gtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGC
EST: gi|193469517|gb|FK435919.1|FK435919
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193537111|gb|FK498850.1|FK498850
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|308222672|gb|HO760582.1|HO760582
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|308222671|gb|HO760581.1|HO760581
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193489305|gb|FK455336.1|FK455336
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193493840|gb|FK458462.1|FK458462
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTTATTTCTTCAGTTGGCTCAAATGC
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACT-ATTTCTTCAGTTGGCTCAAATGC
EST: gi|207828028|gb|GD798843.1|GD798843
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193406402|gb|FK373051.1|FK373051
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208301071|gb|GE100738.1|GE100738
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208259214|gb|GE055464.1|GE055464
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193455332|gb|FK419715.1|FK419715
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGGGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|207801754|gb|GD772970.1|GD772970
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208283994|gb|GE087720.1|GE087720
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAATTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208341760|gb|GE139442.1|GE139442
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCT
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAA-GGATTGAGTTTCCCCACTATTTCTTCAGTTGGCT
EST: gi|208046028|gb|GD848640.1|GD848640
EST:     TTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193340716|gb|FK308337.1|FK308337
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193530935|gb|FK487512.1|FK487512
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACCTATTTCTTCAGTTGGCTCAAATGC
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCAC-TATTTCTTCAGTTGGCTCAAATGC
EST: gi|193363719|gb|FK330897.1|FK330897
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|254337587|gb|GR849433.1|GR849433
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|207688857|gb|GD671796.1|GD671796
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|15001132|gb|BI321946.1|BI321946
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208176280|gb|GD978571.1|GD978571
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193369519|gb|FK333995.1|FK333995
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|207717045|gb|GD699569.1|GD699569
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193500825|gb|FK464944.1|FK464944
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|15337002|gb|BI497658.1|BI497658
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193428687|gb|FK394111.1|FK394111
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193651184|gb|FK598975.1|FK598975
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193562556|gb|FK517771.1|FK517771
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|13482091|gb|BG511434.1|BG511434
EST:     GGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: GGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208117239|gb|GD918153.1|GD918153
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|298186383|gb|HO037016.1|HO037016
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193531419|gb|FK490917.1|FK490917
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208209477|gb|GE008213.1|GE008213
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|207791863|gb|GD765002.1|GD765002
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|207808551|gb|GD779446.1|GD779446
EST:     TGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|5753558|gb|AI960845.1|AI960845
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|7588809|gb|AW704596.1|AW704596
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|208316856|gb|GE111395.1|GE111395
EST:     AGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: AGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193660306|gb|FK603860.1|FK603860
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|254327081|gb|GR836690.1|GR836690
EST:     TGAGGTGACTGTAAGTGACCAGCTTGAAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: TGAGGTGACTGTAAGTGACCAGCTTGAA-GGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193351366|gb|FK315038.1|FK315038
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATCGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193542228|gb|FK494030.1|FK494030
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCCACTATTTCTTCAGTTGGCTCAAATGC
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTT-CCCCACTATTTCTTCAGTTGGCTCAAATGC
EST: gi|193342495|gb|FK306111.1|FK306111
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|193371457|gb|FK336942.1|FK336942
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTAAGTTTCCCCACTA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTA
EST: gi|9902696|gb|BE611664.1|BE611664
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
EST: gi|15286677|gb|BI470568.1|BI470568
EST:     CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAG                         CATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA
genomic: CTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGgtagagctaa ... ctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aactggagagtatgctggcctatgttcaatcataagttttttaccctgttttcagCATTTCAAAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCTCAAATGCAGCTATAATTCACTATTTTCCAAAGGCAGAAACATGTGCTGAACTTGATC
                                    ttttttaccctgtttt  CT-rich tract
                           aatcataagtttttta  TA-rich tract