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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttataataatctatatcattctttaggcagtaattcagtactttgtacaaatctatattatttggaaaacttgtttaccgtggttgcagGAATACTTGTTGAGCAACCATCTATCTTCGTATGATCCATCTGGTATTCAG

Basic information

species Glycine max
transcript GLYMA14G34160.1
intron # 8
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192299439|gb|FG990777.1|FG990777
EST:     ACAGTGAAAAACACCTTGTAGATGTCTTGACACGTGTCATACAAAGAAAG                         GAATACTTGTTGAACAACCATCTATCTTCGTATGATCCATCTGGTA
genomic: ACAGTGAAAAACACCTTGTAGATGTCTTGACACGTGTCATACAAAGAAAGgtttataata ... gtggttgcagGAATACTTGTTGAGCAACCATCTATCTTCGTATGATCCATCTGGTA
EST: gi|151395786|gb|EV265663.1|EV265663
EST:     ACAGTGAAAAACACCTTGTAGATGTCTTGACACGTGTCATACAAAGAAAG                         GAATACTTGTTGAGCAACCATCTATCTTCGTATGATCCATCTGGTATTCAG
genomic: ACAGTGAAAAACACCTTGTAGATGTCTTGACACGTGTCATACAAAGAAAGgtttataata ... gtggttgcagGAATACTTGTTGAGCAACCATCTATCTTCGTATGATCCATCTGGTATTCAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcagtactttgtacaaatctatattatttggaaaacttgtttaccgtggttgcagGAATACTTGTTGAGCAACCATCTATCTTCGTATGATCCATCTGGTATTCAG
       tttgtacaaatctata  TA-rich tract