1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gttttttctttcttcatatttggactcttttaagtaagctaaggagttgtttgaccaaaggcatctcaataatttctttcagACTTTTATTGAACTATCTTTTATGGAAGCAGTACAAGGGTGCACCAAAACTTTGACATTTCAAACGGATGTGCTTTGTAATGCTTGTG
species | Glycine max |
transcript | GLYMA12G36820.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: ATTTTGTCAAGAGCTTCTTCCATCAGAATATTGGTGGAGAGGATGTCAAG ACTTTTATTGAACTATCTTTTATGGAAGCAGTACAAGGGTGCACCAAAACTEST: gi|27446060|gb|CA953183.1|CA953183
genomic: ATTTTGTCAAGAGCTTCTTCCATCAGAATATTGGTGGAGAGGATGTCAAGgttttttctt ... tttctttcagACTTTTATTGAACTATCTTTTATGGAAGCAGTACAAGGGTGCACCAAAACT
EST: TTTTGTCAAGAGCTTCTTCCATCAGAATATTGGTGGGAGAGGATGTCAAG ACTTTTATTGAACTATCTTTTATGGAAGCAGTACAAGGGTGCACCAAAACT
genomic: TTTTGTCAAGAGCTTCTTCCATCAGAATATTGGTGG-AGAGGATGTCAAGgttttttctt ... tttctttcagACTTTTATTGAACTATCTTTTATGGAAGCAGTACAAGGGTGCACCAAAACT
ttttaagtaagctaaggagttgtttgaccaaaggcatctcaataatttctttcagACTTTTATTGAACTATCTTTTATGGAAGCAGTACAAGGGTGCACCAAAACTTTGACATTTCAAACGGATGTGCTTTGTAATGCTTGTG
gtttgac putative branch site (score: 4)
tttctttc putative PPT
tcaataatttcttt TA-rich tract