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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagatttgcatgttttcttctctaggtctagagtttggtcaggtctatgggtcatatacttgtcacacagctgattcttacttgaagtagttcaatgtctaacattcattattgcttgaagGATCCTTACATACTCTGCTGGGATGTGCGCAAATCTGTTGATTGTGTCTACAA

Basic information

species Glycine max
transcript GLYMA07G30960.1
intron # 8
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51335098|gb|CO978964.1|CO978964
EST:     GTCCAGTTTTCCAGAGATGGAAATTATTTATATACTGGAGGTCGGAAG                         GATCCTTACATACTCTGCTGGGATGTGCGCAAATCTGTTGATTGTGTCTAC
genomic: GTCCAGTTTTCCAGAGATGGAAATTATTTATATACTGGAGGTCGGAAGgtaagatttg ... ttgcttgaagGATCCTTACATACTCTGCTGGGATGTGCGCAAATCTGTTGATTGTGTCTAC






















 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acagctgattcttacttgaagtagttcaatgtctaacattcattattgcttgaagGATCCTTACATACTCTGCTGGGATGTGCGCAAATCTGTTGATTGTGTCTACAA
                              gtctaac  putative branch site (score: 2)
                                 taacattcattatt  TA-rich tract