1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gttagtaccgtttggaaacttagtctccttttctttcaatttaaattttttttcttctagtttgtagtttgtactaaagtgtctttctttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGCCAATAATTTACCATGATAGCCAACTAGTTTTGTATGGAGTAGAGAGAA
species | Glycine max |
transcript | GLYMA07G01660.5 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAA-G TACTTCC-TGCAA-GCTGAEST: gi|15661860|gb|BI699231.1|BI699231
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGA
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAG TACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGEST: gi|9984916|gb|BE659024.1|BE659024
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAG TACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGEST: gi|192315625|gb|FK007453.1|FK007453
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
EST: GAATTGACGTTGAAAGGGTCAA-CCATACTATCTCTCC-TCAT-GAAAAG TACTTCCCTGCAA-GCTGAAGTGGTGAAGAGT-AATTGGAGCCATGA-GTGEST: gi|31457327|gb|CD399355.1|CD399355
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAG TACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGEST: gi|192295840|gb|FG992636.1|FG992636
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAG TACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGEST: gi|6964484|gb|AW433177.1|AW433177
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAG TACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGEST: gi|163921205|gb|EH039507.1|EH039507
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAG TACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGEST: gi|192315626|gb|FK007454.1|FK007454
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
EST: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAG TACTTCCCTGCAAAGCTGA-GTGGTGA-GAGTTA-TTGGAGC-ATGA-GTG
genomic: GAATTGACGTTGAAAGGGTCAAACCATACTATCTCTCCCTCATTGAAAAGgttagtaccg ... tttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTG
aaattttttttcttctagtttgtagtttgtactaaagtgtctttctttgctgcagTACTTCCCTGCAAAGCTGAAGTGGTGAAGAGTTAATTGGAGCCATGAAGTGCCAATAATTTACCATGATAGCCAACTAGTTTTGTATGGAGTAGAGAGAA
tactaaa putative branch site (score: 1)
tgtctttctttgct CT-rich tract
ttttttctt TA-rich tract