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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgtcatatatatgttgcttaatcattcattccaagctctatctcttatttttagttttttaaagactcaaatgagtttatggcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACCAAGGCCCCTCTGGTAA

Basic information

species Glycine max
transcript GLYMA05G31450.3
intron # 8
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G31450.3 (Glycine max), 3'ss of exon 8
lower sequence: GRMZM2G010768_T01 (Zea mays), 3'ss of exon 2
gtttgtcatatatatgttgcttaatcattcattccaagctctatctcttatttttagttttttaaagactcaaatga-gtttatggcttca-acagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACCAAGGCCCCTCTGGTAA
|| | || | |||| | | | || | || | ||| | | || | | | | | |||| || |||||||| |||||||| || || ||||||||||| ||||| |||||||| || |||
---------gtaagagcccaccaagtgaataacccaaagcatgttaggtgattcaacgcttcagcaccatcatctaatgtctctctcattatgcagGACAAGTTCCACTCCTTCCACCCGGTGGCCACCATCCTTAGCTACCTCACCAAGGCACCACTG----

upper sequence: GLYMA05G31450.3 (Glycine max), 3'ss of exon 8
lower sequence: GRMZM2G392513_T02 (Zea mays), 3'ss of exon 6
gtttgtcatatatatgttgcttaatcattcattccaagctctatctcttatttttagttttttaaagac--tcaaatgagtttatggcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACCAAGGCCCCTCTGGTAA
|| | | | | | | | | || |||| | | ||| | || | | || |||| | | | | |||| || |||||||| |||||||| || || ||||||||||| ||||| |||||||| || |||
-------gta-agagcccaccaagtgaataactcgaagcatgctaggtgattcagcgcttcagcaccatcatctaatgtctctctcattatg-cagGACAAGTTCCACTCCTTCCACCCGGTGGCCACCATCCTTAGCTACCTCACCAAGGCACCACTG----

upper sequence: GLYMA05G31450.3 (Glycine max), 3'ss of exon 8
lower sequence: GRMZM2G004528_T03 (Zea mays), 3'ss of exon 8
gtttgtcatatatatgttgcttaatcattcattccaagctctatctcttat--ttttagttttttaaagactcaaatga-gtttatggcttca-acagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACCAAGGCCCCTCTGGTAA
|| | ||| || | || ||| | | | || | | | ||| | | || | | | | | |||| || |||||||| |||||||| || || ||||||||||| ||||| |||||||| || |||
---------gtaagagcccacgaataatccgaagcatgctgggtgattcagcgcttcggcaatcagcaccatcatctaacgtctctctcattatgcagGACAAGTTCCACTCCTTCCACCCGGTGGCCACCATCCTTAGCTACCTCACCAAGGCACCACTG----

upper sequence: GLYMA05G31450.3 (Glycine max), 3'ss of exon 8
lower sequence: GRMZM2G155242_T01 (Zea mays), 3'ss of exon 8
gtttgtcatatatatgttgcttaatcattcattccaagctctatctcttatt-tttagttttttaaagactcaaatgagtttatggcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACCAAGGCCCCTCTGGTAA
|| | | || | |||| | | | || ||| | | | ||| ||| || || | || | | ||| |||| ||||||||||| |||||||| || || |||||||| || ||||| |||||||| || |||
gtaagagccccccaagt-gattaacc--tgaaagcacgctgcacgctaggtgatatagcacttttaataccttctggtgtctct--cttatgcagGACAAATTCCACTCCTTCCACCCGGTGGCCACCATCCTGAGCTACCTCACCAAGGCACCCCTG----

upper sequence: GLYMA05G31450.3 (Glycine max), 3'ss of exon 8
lower sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 8
gtttgtcatatatatgttgcttaatcattcattccaagctctatctcttatttttagttttttaaagactcaa--atgagtttatggcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACCAAGGCCCCTCTGGTAA
| | | | | || ||| | || | |||| || | |||||| | | || | | || | | | || |||| || || || || |||||||||||||| |||||||| |||||||| |||||||||||||||
-------gtctgttttcttctgcatc-cttatgggaccctcttgctttggtttttaccatcacatggaatgattcataggatgttcaattttgcagGACAAGTTTCATTCCTTCCACCCAGTTGCCACCATCCTCAGTTACCTCACCAAGGCCCCTCTG----

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26269143|gb|CA820206.1|CA820206
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|12688993|gb|BG155329.1|BG155329
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|17020881|gb|BM091915.1|BM091915
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193637582|gb|FK579495.1|FK579495
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|14999700|gb|BI320514.1|BI320514
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193456225|gb|FK423041.1|FK423041
EST:     TTCTTGCTGAGCTCAGCACTCGAATCGAAGTTTAAAGCTAGAAAATGAAG                         GGAAAATTCCACTCATT
genomic: TTCTTGCTGAGCTCAGCACTCGAATCGA-GTTTAAAGCT-GAAAATGA-Ggtttgtcata ... gcttcaacagGGAAAATTCCACTCATT
EST: gi|22931708|gb|BU548847.1|BU548847
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|10231949|gb|BE800837.1|BE800837
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTNTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|13790509|gb|BG653100.1|BG653100
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193531203|gb|FK486268.1|FK486268
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATT
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATT
EST: gi|9204909|gb|BE331133.1|BE331133
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|151406372|gb|EV276187.1|EV276187
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|10253117|gb|BE820883.1|BE820883
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|208284958|gb|GE086934.1|GE086934
EST:     GAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: GAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|15285788|gb|BI469679.1|BI469679
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|8669934|gb|BE191041.1|BE191041
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCTACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|10847107|gb|BF069873.1|BF069873
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTNTAAAGCTGAAAATGAN                         GGAAAATTNCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTTGAC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCT-GAC
EST: gi|27425861|gb|CA937381.1|CA937381
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193302180|gb|FK267351.1|FK267351
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCAT
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCAT
EST: gi|193620855|gb|FK569965.1|FK569965
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|12688896|gb|BG155232.1|BG155232
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|120492376|gb|EH220543.1|EH220543
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|6913141|gb|AW394671.1|AW394671
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|22525838|gb|BU084649.1|BU084649
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|6718757|gb|AW306404.1|AW306404
EST:     CCTTCTTGCTGAGCTCAGCACTCGAAATCGAGTT-AAAGCTGAAAATGAG                         GGAAGATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: CCTTCTTGCTGAGCTCAGCACTCGAA-TCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|207756425|gb|GD729564.1|GD729564
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|208031199|gb|GD829797.1|GD829797
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|208178267|gb|GD978780.1|GD978780
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|22522672|gb|BU081483.1|BU081483
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|20498695|gb|BQ273625.1|BQ273625
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|7283317|gb|AW595925.1|AW595925
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTNTAAAGCTGANAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193479251|gb|FK446724.1|FK446724
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|120495709|gb|EH223876.1|EH223876
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|13788713|gb|BG651304.1|BG651304
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|120529467|gb|EH257601.1|EH257601
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|192305244|gb|FG997524.1|FG997524
EST:     CTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: CTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193360438|gb|FK328078.1|FK328078
EST:     CCTTCTTGTCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: CCTTCTTG-CTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|208206425|gb|GE005436.1|GE005436
EST:     TTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193404431|gb|FK365340.1|FK365340
EST:     CCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAAG                         GGAAAATTCCACTCATTCCA
genomic: CCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGA-Ggtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCA
EST: gi|15664440|gb|BI701811.1|BI701811
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|120493361|gb|EH221528.1|EH221528
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|208029216|gb|GD830992.1|GD830992
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193530412|gb|FK486611.1|FK486611
EST:     CCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAAG                         GGAAAATTCCACTCATT
genomic: CCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGA-Ggtttgtcata ... gcttcaacagGGAAAATTCCACTCATT
EST: gi|193479156|gb|FK448085.1|FK448085
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|17021005|gb|BM092039.1|BM092039
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|20448537|gb|BQ252661.1|BQ252661
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|192305229|gb|FG997523.1|FG997523
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|20812941|gb|BQ297419.1|BQ297419
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTC
EST: gi|10234327|gb|BE803215.1|BE803215
EST:     GCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|15285651|gb|BI469542.1|BI469542
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|192300396|gb|FG987883.1|FG987883
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|14008873|gb|BG725477.1|BG725477
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACN
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGAC-
EST: gi|193407431|gb|FK370259.1|FK370259
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCT
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCT
EST: gi|15287101|gb|BI470992.1|BI470992
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|207783762|gb|GD756000.1|GD756000
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCA
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCA
EST: gi|9986213|gb|BE660321.1|BE660321
EST:     CCTTCTTGCTGAGCTCAGCACTNNGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTTCACTTCATTTCCACCCAGTTTGCGAACCATTCTTAGNTACTT
genomic: CCTTCTTGCTGAGCTCAGCACTC-GAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACT-CATT-CCACCCAGTT-GCGA-CCATCCTTAGTTACCT
EST: gi|120496079|gb|EH224246.1|EH224246
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|17964415|gb|BM271150.1|BM271150
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|5677640|gb|AI938770.1|AI938770
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|15203180|gb|BI425948.1|BI425948
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|10231153|gb|BE800100.1|BE800100
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCTACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|9902218|gb|BE611186.1|BE611186
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|12688968|gb|BG155304.1|BG155304
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|192301389|gb|FG994713.1|FG994713
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|208042232|gb|GD839510.1|GD839510
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|120495212|gb|EH223379.1|EH223379
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|208143541|gb|GD943329.1|GD943329
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193345988|gb|FK310796.1|FK310796
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACC-AGTTG
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTG
EST: gi|193647841|gb|FK595714.1|FK595714
EST:     TTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|17021564|gb|BM092598.1|BM092598
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|15200236|gb|BI424244.1|BI424244
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|7234796|gb|AW570129.1|AW570129
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|193594921|gb|FK546346.1|FK546346
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|22933777|gb|BU550916.1|BU550916
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|120492865|gb|EH221032.1|EH221032
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|6964194|gb|AW432887.1|AW432887
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|10234429|gb|BE803317.1|BE803317
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|7029141|gb|AW458924.1|AW458924
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|10231383|gb|BE800271.1|BE800271
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
EST: gi|9204546|gb|BE330770.1|BE330770
EST:     TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAG                         GGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC
genomic: TCCTTCTTGCTGAGCTCAGCACTCGAATCGAGTTTAAAGCTGAAAATGAGgtttgtcata ... gcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctatctcttatttttagttttttaaagactcaaatgagtttatggcttcaacagGGAAAATTCCACTCATTCCACCCAGTTGCGACCATCCTTAGTTACCTGACCAAGGCCCCTCTGGTAA
        ttatttttagtttttt  TA-rich tract