1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaaaatttttgttacactgtcttttatatatcaaaccaatacatatactaacatagttttatctttaaagGGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATACTGTCGGTTTCAAGTGGCGATTCCACCAACAAAGTCAAATGTGAAAA
species | Glycine max |
transcript | GLYMA01G42360.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAG GGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATAEST: gi|192313508|gb|FK004132.1|FK004132
genomic: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAGgtaaaatttt ... atctttaaagGGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATA
EST: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAG GGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATAEST: gi|16342473|gb|BI968068.1|BI968068
genomic: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAGgtaaaatttt ... atctttaaagGGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATA
EST: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAG GGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATAEST: gi|192319988|gb|FK013008.1|FK013008
genomic: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAGgtaaaatttt ... atctttaaagGGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATA
EST: TGGCTCAATCGATCACTAGG-CAATTGTACA-GATTTTCTGATTTTAAAG G-CCCT-GTCCCA-CTGTGGTACTGAAAATAEST: gi|192313523|gb|FK004133.1|FK004133
genomic: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAGgtaaaatttt ... atctttaaagGGCCCTTGTCCCAACTGTGGTACTGAAAATA
EST: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAG GGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATA
genomic: TGGCTCAATCGATCACTAGGGCAATTGTACAAGATTTTCTGATTTTAAAGgtaaaatttt ... atctttaaagGGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATA
actgtcttttatatatcaaaccaatacatatactaacatagttttatctttaaagGGCCCTTGTCCCAACTGTGGTACTGAAAATACCTCTTTCTTTGGGACTATACTGTCGGTTTCAAGTGGCGATTCCACCAACAAAGTCAAATGTGAAAA
tactaac putative branch site (score: 0)
ttttatcttt putative PPT
atatactaacatagtt TA-rich tract