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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gcagatactatatatatatatatatatatatatatatgagtaccatttgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG

Basic information

species Glycine max
transcript GLYMA01G25940.1
intron # 8
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: LOC_Os03g26970.1 (Oryza sativa), 3'ss of exon 7
-----------------------------------------------------------gcagatactatatatatatatatatatatatatatatgagtaccatttgtaatagagggaat-cgaaggttgtgatttgatgtgat--ttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
                                                           ||  | | | | | | | | | | | |   |  | |  | | | ||||   |    |    |   ||  |||      | ||  ||  |  || |||   ||||| |||||||| || ||||| || || |||||||| || ||||||||||||||||| || ||||||||||| ||||||||||| ||
gtattgacaaataattatatacaacagagaaggttttgtgtaaatacaaagtgtcaaatgcgaacaatctttctttctttttttcttgcttcagaccattgc-atttacgactttgtagttattaatattgcagacagttgacattgtcattgttttattagGTTGATCCATCAGGGTCATACTTCTCCTGGAAAGCATCAGCTATGGGGAAAAATGTGTCAAATGCAAAGACATTTCTTGAGAAAAG

upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: LOC_Os02g42320.1 (Oryza sativa), 3'ss of exon 6
---gcagatactatatatatatatatatatatatatatatgagtaccatttgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
      | |  | |  |   | || | ||  | |  || ||   |   ||||| || | |  ||       |  ||    |||||| | | || |||||  |||| ||||| || || ||||| || || |||||||| || ||||||||||||||||| || ||||||||||| |||||||| || ||
agttttgttcttctggactgaaattt-tacctgtcaatttgt-catattttgttatggtgtaaaattggtataatg-ccagatgtgctgtattatttctacagGTTGATCCCTCAGGATCATACTTCTCCTGGAAAGCATCAGCTATGGGGAAAAATGTCTCCAATGCAAAGACATTTCTTGAAAAAAG

upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: GRMZM5G824831_T01 (Zea mays), 3'ss of exon 9
---gcagatactatatatatatatatatatatatat-atatgagtaccatttgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
   |   ||| | | ||  | | |    | |   |  ||   | |      ||||        ||   | |      |  |||  |  ||     |||||  |||| ||||| || || ||||| || || ||||| || || || ||||| |||||||| || |||||||||||||||||||| |||||
aaagtgaataatgtgtacttttgtgctaacaatcaccatgatactgtaggatgtaccttcataaactcaggac----aactgacattgttgccaatttcttcagGTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGGAAAAAATGTGTCCAATGCAAAGACGTTTCTTGAAAAGAG

upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: GRMZM5G824831_T03 (Zea mays), 3'ss of exon 8
----------------------------------------------------------------------------------------gcagatactatatatata-tatatatatatatatatatgagtaccatt-tgtaatagagggaatcg----aaggttgtgat--ttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
                                                                                        | |  ||  |  |  ||| | | ||  | | |    |  |  |||||  |    |||   | | |     ||  |   ||    |||  |  ||     |||||  |||| ||||| || || ||||| || || ||||| || || || ||||| |||||||| || |||||||||||||||||||| |||||
gtatactgaagaagctacaagatagaaacctgtttattaaccttccaaagaaaactgcttattgctttacaagagatgatcacaagtagtacttagaaagtgaataatgtgtacttttgtgctaacaatcaccatgatactgtaggatgtaccttcataaactcaggacaactgacattgttgccaatttcttcagGTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGGAAAAAATGTGTCCAATGCAAAGACGTTTCTTGAAAAGAG

upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: GRMZM2G382240_T02 (Zea mays), 3'ss of exon 6
gcagatactatatatatatatatatatatatat-atatgagtaccatttgtaatagagggaa-tcgaaggttgtgat--ttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
    | | | |  | |||| | |  | |   |  ||   | |      ||||     |  || || |  ||   ||    |||  |  || | | |||||  |||| ||||| || || ||||| || || ||||| || || || ||||| |||||||| || ||||||||||| |||||||| |||||
----aaaatgtgcacatatgtgttaacaatcaccatgatactgtaggatgtaccttcgtaaactcaagagtcaagacaactgacattgttggctatttcttcagGTTGATCCCTCAGGATCATACTTCTCCTGGAAGGCATCAGCCATGGG-AAAAATGTGTCAAATGCAAAGACATTTCTTGAAAAGAG

upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: AT1G79210.3 (Arabidopsis thaliana), 3'ss of exon 8
gcagatactatatatatatatatatatatatatatatgagtaccatttgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
| |  ||  |  |  |   | |||||   ||     | |     |  |  ||       | |  ||   | | |||| ||    |||  ||   |  |||||||||||||| || || ||||| || |||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||
gtaagtagaactttaaagaaaatataaccatcctgctcaaagtgaagtaaaacccgtaaactgaaaacatcttatttcata-attttcattggccactagGTGGATCCATCTGGCTCTTATTTCTCATGGAAAGCTTCTGCAATGGGAAAGAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG

upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: AT1G16470.1 (Arabidopsis thaliana), 3'ss of exon 8
gcagatactatatatatatatatatata---tatatatatgagtaccatttgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
  |  ||| || |     |    |||||   |    ||   |       || | |        |     |||| | |||  |     ||||||||| |  |||||||||||||| || || ||||| || ||||||||||| || |||||||| || ||||| |||||||| || || |||||||| ||
--aattaccatctcatcttgagaatataacctgagaattaaaactttgcttttgaatttccttactcggggtt-taattcaaatcattttgtttttgcactagGTGGATCCATCTGGCTCTTATTTCTCCTGGAAAGCTTCAGCCATGGGGAAGAACGTTTCTAATGCAAAAACCTTCCTTGAGAAAAG

upper sequence: GLYMA01G25940.3 (Glycine max), 3'ss of exon 8
lower sequence: Vv01s0011g01960.t01 (Vitis vinifera), 3'ss of exon 7
gcagatactatatatatatatatatatatatatatatgagtac-catt--tgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
     || ||||  | | |   | | | | | ||    |     ||||  | ||||      |||    | |  |  |    |     ||  | |  || |||||||||||||| ||||||||||| || |||||||| || || |||||||| ||||| || ||||||||||| ||||||||||||||
--cattattataagttt-tgagtctgtttttttaccctatcctgcattagtataatgctacaaatttctgctaatattcatttacttatttatatgcctctagGTGGATCCATCAGGTTCATATTTCTCATGGAAAGCCTCCGCAATGGGGAAGAATGTCTCAAATGCAAAGACATTTCTTGAGAAGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192309680|gb|FG999893.1|FG999893
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|24206299|gb|BU965552.1|BU965552
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|15204528|gb|BI427296.1|BI427296
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAN                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|120495257|gb|EH223424.1|EH223424
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|208136336|gb|GD940136.1|GD940136
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|9564578|gb|BE474087.1|BE474087
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAC                         GTGGATCCATCGGGTTCATATTTTTCTTTGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|208286744|gb|GE085318.1|GE085318
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|298198188|gb|HO039727.1|HO039727
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|58014614|gb|CX701356.1|CX701356
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|192325446|gb|FK018387.1|FK018387
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|18690708|gb|BM519556.1|BM519556
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|120494647|gb|EH222814.1|EH222814
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|57575724|gb|CX548699.1|CX548699
EST:     GGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: GGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|8403449|gb|BE059083.1|BE059083
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|4313519|gb|AI460638.1|AI460638
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGGAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|14259203|gb|BG882111.1|BG882111
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTTATATTTTTNTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|7925135|gb|AW831161.1|AW831161
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAC                         GTGGATCCATCGCGTTCATATTCNTCTCGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|192316847|gb|FK010834.1|FK010834
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTTTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|151406778|gb|EV276593.1|EV276593
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAG
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|4397406|gb|AI496403.1|AI496403
EST:     GTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAAG                         G-GGATCCATTCGG-TTCATATTNNTCTTGGAAAGCT
genomic: GTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCA-Ggtgtgtaaac ... ttttctgtagGTGGATCCAT-CGGGTTCATATTTTTCTTGGAAAGCT
EST: gi|21889053|gb|BQ742266.1|BQ742266
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGGAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|19348090|gb|BM892622.1|BM892622
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|19052912|gb|BM731579.1|BM731579
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCAT
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCAT
EST: gi|193627782|gb|FK577964.1|FK577964
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
EST: gi|20448816|gb|BQ252940.1|BQ252940
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTC
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTC
EST: gi|192326825|gb|FK018922.1|FK018922
EST:     TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAG                         GTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA
genomic: TGTCACTGCTTGTTGCTGGATTTGATGATAATGGACCACAATTATATCAGgtgtgtaaac ... ttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG
                            atttgat  putative branch site (score: 5)
                                       tttgttttttctgt  putative PPT
                                      atttgtttttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gcagatactatatatatatatatatatatatatatatgagtaccatttgtaatagagggaatcgaaggttgtgatttgatgtgatttgttttttctgtagGTGGATCCATCGGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCGAATGCAAAGACGTTTCTTGAGAAGAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAAG
- - - - - - - - - - - - - - - - - - - - - ccatttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - gagggaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggttgtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgatgtg