1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ggtgagccgtacatgttcttcaaatttactgttgttatgttctagtggtgccatgatcaccctttgtgataactggtttaataaaatatcaGATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAAATCATACGCAAGACACAGTTTTTCAAGGCAAATTGCGCTCTTGTAATCA
species | Glycine max |
transcript | GLYMA18G08420.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TGTTCTGTTATGATCTAAAACTTCCAAAAGATTTCATTCCGAAAAATAAA GATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAAEST: gi|31466953|gb|CD408981.1|CD408981
genomic: TGTTCTGTTATGATCTAAAACTTCCAAAAGATTTCATTCCGAAAAATAAAggtgagccgt ... taaaatatcaGATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAA
EST: TGTTCTGTTATGATCTAAAACTTCCGAAAGATTTCATTCCGAAAAATAAA GATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAAEST: gi|10235626|gb|BE804514.1|BE804514
genomic: TGTTCTGTTATGATCTAAAACTTCCAAAAGATTTCATTCCGAAAAATAAAggtgagccgt ... taaaatatcaGATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAA
EST: TGTTCTGTTATGATCTAAAACTTCCAAAAGATTTCATTCCGAAAAATAAA GATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAAEST: gi|31561695|gb|CD487533.1|CD487533
genomic: TGTTCTGTTATGATCTAAAACTTCCAAAAGATTTCATTCCGAAAAATAAAggtgagccgt ... taaaatatcaGATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAA
EST: TGTTCTGTTATGATCTAAAACTTCCAAAAGATTTCATTCCGAAAAATAAA GATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAA
genomic: TGTTCTGTTATGATCTAAAACTTCCAAAAGATTTCATTCCGAAAAATAAAggtgagccgt ... taaaatatcaGATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAA
atgttctagtggtgccatgatcaccctttgtgataactggtttaataaaatatcaGATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAAATCATACGCAAGACACAGTTTTTCAAGGCAAATTGCGCTCTTGTAATCA
ataactggtttaataa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ggtgagccgtacatgttcttcaaatttactgttgttatgttctagtggtgccatgatcaccctttgtgataactggtttaataaaatatcaGATGGAGAAGTTGATAGCTTCAAGTTGATCCCTGTTACACAAGTTGCAGAAATCATACGCAAGACACAGTTTTTCAAGGCAAATTGCGCTCTTGTAATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA