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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtagattcgtccttctgactttctgagtatgcaagctgagacctcaatttgatttctttgttttgaactgatgattgatccccgccctcttttttcgctgttcttgacaaatgttatgataatcttctgatgacacgaaacaactgtctttgcttcacagACATCTCTAGAAGGTGCAGTGCGTGTTTGGTTCAAAAGCTTCCGAAGAAAACTTAAAAAAATATATATTTTTTTTCAACTTTAATCTTTACCAGACATGG

Basic information

species Glycine max
transcript GLYMA16G32510.2
intron # 7
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gacaaatgttatgataatcttctgatgacacgaaacaactgtctttgcttcacagACATCTCTAGAAGGTGCAGTGCGTGTTTGGTTCAAAAGCTTCCGAAGAAAACTTAAAAAAATATATATTTTTTTTCAACTTTAATCTTTACCAGACATGG
                   ttctgat  putative branch site (score: 3)
                                         tctttgcttc  putative PPT
        ttatgataat  TA-rich tract