1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgatttttccccccattattttggctgtggttggtttcttgctttgcatttaagcaactgactttttgtacttgtctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATTCGTAGTTAGGAACTGATATAATGCTGCCTTTCAAGCTGCTTCGGAAAT
species | Glycine max |
transcript | GLYMA15G04290.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193537914|gb|FK495075.1|FK495075
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193581120|gb|FK535459.1|FK535459
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193370577|gb|FK334101.1|FK334101
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193598751|gb|FK552019.1|FK552019
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGA-TTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|207762646|gb|GD733451.1|GD733451
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208123263|gb|GD926335.1|GD926335
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: TGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CTGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208340341|gb|GE135833.1|GE135833
genomic: TGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: GGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAAATGCTGCCACTGTGAAGAAGAATTGAAAEST: gi|208038499|gb|GD833251.1|GD833251
genomic: GGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCAT-AAATGCTGCCACTGTGAAGAAGAATTGAAA
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|19935342|gb|BQ080372.1|BQ080372
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193667181|gb|FK613479.1|FK613479
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CGCACAGCCCGATGTTGTATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193687214|gb|FK630875.1|FK630875
genomic: CGCACAGCCCGATGTTG-ATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGGTGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193327731|gb|FK295054.1|FK295054
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CGCACAGACCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|7925193|gb|AW831219.1|AW831219
genomic: CGCACAG-CCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|48574787|gb|CO036077.1|CO036077
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|6095203|gb|AW119870.1|AW119870
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208313394|gb|GE115978.1|GE115978
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193606979|gb|FK557368.1|FK557368
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: GCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208144099|gb|GD943760.1|GD943760
genomic: GCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: TTGATGGTATTTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193413289|gb|FK377342.1|FK377342
genomic: TTGATGG-A-TTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG GEST: gi|193413289|gb|FK377342.1|FK377342
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattag-
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG GEST: gi|193331092|gb|FK293252.1|FK293252
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattag-
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193663871|gb|FK612877.1|FK612877
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGA-TTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193354448|gb|FK321196.1|FK321196
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG AEST: gi|193354448|gb|FK321196.1|FK321196
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattag-
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG AEST: gi|193445476|gb|FK413967.1|FK413967
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattag-
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGEST: gi|208193109|gb|GD987990.1|GD987990
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTG
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208154245|gb|GD958406.1|GD958406
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208287509|gb|GE085761.1|GE085761
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: GGTGGTGCCTCCCTGTAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAEST: gi|193608058|gb|FK555711.1|FK555711
genomic: GGTGGTGCCTCCCTG-AAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAA
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAAGAAATTGAAEST: gi|208303964|gb|GE105683.1|GE105683
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAA-GAA-TTGAA
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCAEST: gi|193607426|gb|FK559153.1|FK559153
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCA
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208240522|gb|GE040094.1|GE040094
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193665522|gb|FK614282.1|FK614282
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGACTGCCACTGTGAAGAAGAATTGAAAEST: gi|7028322|gb|AW458105.1|AW458105
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATG-CTGCCACTGTGAAGAAGAATTGAAA
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193664847|gb|FK610849.1|FK610849
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193592849|gb|FK548755.1|FK548755
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: AGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGGAGAAGAATTGAAATEST: gi|193535473|gb|FK492143.1|FK492143
genomic: AGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193559178|gb|FK515937.1|FK515937
genomic: CCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193722852|gb|FK657904.1|FK657904
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGGTGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208295542|gb|GE090475.1|GE090475
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193647093|gb|FK593118.1|FK593118
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGCTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|207753705|gb|GD723303.1|GD723303
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|208055143|gb|GD852376.1|GD852376
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|193467546|gb|FK431315.1|FK431315
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTT-GGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGEST: gi|8402137|gb|BE057771.1|BE057771
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAG
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATEST: gi|20813897|gb|BQ298375.1|BQ298375
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
EST: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAG CCGTAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
genomic: CCGCACAGCCCGATGTTGATGGATTTTTGGTTGGTGGTGCCTCCCTGAAGgtgatttttc ... ctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAAT
ttggtttcttgctttgcatttaagcaactgactttttgtacttgtctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATTCGTAGTTAGGAACTGATATAATGCTGCCTTTCAAGCTGCTTCGGAAAT
aactgac putative branch site (score: 2)
cttgtct putative PPT
tttttgta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgatttttccccccattattttggctgtggttggtttcttgctttgcatttaagcaactgactttttgtacttgtctgtaattagCCGGAGTTCGTGGACATCATAAATGCTGCCACTGTGAAGAAGAATTGAAATTCGTAGTTAGGAACTGATATAATGCTGCCTTTCAAGCTGCTTCGGAAAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT