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gtaagcatgtgcatgttaatatatttctcctatcttcataatctcatatgctctataacagtttctgctttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
species | Glycine max |
transcript | GLYMA20G23670.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: AAAAATTGCTCCAGATTTGTCAAAAGAAGACC-TGAAAGATATTGCTGCA GTTGCCTTGACTCTTCACTTGGATGGACTGEST: gi|26058429|gb|CA801343.1|CA801343
genomic: AAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTG-AAGATATTGCTGCAgtaagcatgt ... ttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
EST: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCA GTTGCCTTGACTCTTCACTTGGATGGACTGEST: gi|17022514|gb|BM093548.1|BM093548
genomic: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCAgtaagcatgt ... ttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
EST: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCA GTTGCCTTGACTCTTCACTTGGATGGACTGEST: gi|58019265|gb|CX706007.1|CX706007
genomic: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCAgtaagcatgt ... ttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
EST: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCA GTTGCCTTGACTCTTCACTTGGATGGACTGEST: gi|58016319|gb|CX703061.1|CX703061
genomic: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCAgtaagcatgt ... ttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
EST: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCA GTTGCCTTGACTCTTCACTTGGATGGACTG
genomic: TAAAAATTGCTCCAGATTTGTCAAAAGAAGACCTTGAAGATATTGCTGCAgtaagcatgt ... ttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
ttctcctatcttcataatctcatatgctctataacagtttctgctttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
tttctgcttt CT-rich tract
ttcataat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagcatgtgcatgttaatatatttctcctatcttcataatctcatatgctctataacagtttctgctttgattgtagGTTGCCTTGACTCTTCACTTGGATGGACTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA