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gtttgctttacagtatatgcacactttgttctctcccttttttctattttttgtgaacaatcaaggaatgacacacaaatgggacagGTTTTGTGGATGGCCTGGAGATGGGAAATAATACAAAA
species | Glycine max |
transcript | GLYMA19G07410.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: AGGAGTCGAACTGTGTGGAACTTTGAAAAATGTTGTGGCCATAGCGGCAG GTTTTGTGGATGGCCTGGAGATGGGAAATAATACAAAAEST: gi|42722611|gb|CK768510.1|CK768510
genomic: AGGAGTCGAACTGTGTGGAACTTTGAAAAATGTTGTGGCCATAGCGGCAGgtttgcttta ... aatgggacagGTTTTGTGGATGGCCTGGAGATGGGAAATAATACAAAA
EST: AGGAGTCGAACTGTGTGGAACTTTGAAAAATGTTGTGGCCATAGCGGCAG GTTTTGTGGATGGCCTGGAGATGGGAAAAAATACAAAAEST: gi|9983263|gb|BE657371.1|BE657371
genomic: AGGAGTCGAACTGTGTGGAACTTTGAAAAATGTTGTGGCCATAGCGGCAGgtttgcttta ... aatgggacagGTTTTGTGGATGGCCTGGAGATGGGAAATAATACAAAA
EST: AAAAATGTTGTGGCCATAGCGGCAG GTTTTGTGGATGGCNTNNNGATGGGAAATAATANANAA
genomic: AAAAATGTTGTGGCCATAGCGGCAGgtttgcttta ... aatgggacagGTTTTGTGGATGGCCTGGAGATGGGAAATAATACAAAA
ctcccttttttctattttttgtgaacaatcaaggaatgacacacaaatgggacagGTTTTGTGGATGGCCTGGAGATGGGAAATAATACAAAA
ttttttctattttttg TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtttgctttacagtatatgcacactttgttctctcccttttttctattttttgtgaacaatcaaggaatgacacacaaatgggacagGTTTTGTGGATGGCCTGGAGATGGGAAATAATACAAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG