1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtacaggtttgttatttctagtttacgtctgtttttgttcaaaaggaagttgatgcagttttatttttctcatcccctattgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTTTTCATTCAGAACTATCTGCAACATGAGAAAGTGCAACACACCCAAACC
species | Glycine max |
transcript | GLYMA18G00920.2 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|254326113|gb|GR840705.1|GR840705
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|208241879|gb|GE041073.1|GE041073
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGA-TTTTCCATGATGACAAGTCACAG-AAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCTAATEST: gi|193340774|gb|FK308731.1|FK308731
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTC-AAT
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|193613910|gb|FK562694.1|FK562694
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: AATGGGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|193342494|gb|FK306110.1|FK306110
genomic: AATGGGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|193409098|gb|FK373228.1|FK373228
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGATTTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|193420265|gb|FK388245.1|FK388245
genomic: GGTGCTAGGCCAGGATTTTT-CCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|193429121|gb|FK393215.1|FK393215
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|58022050|gb|CX708791.1|CX708791
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGCCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|4289526|gb|AI441488.1|AI441488
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: AATGGGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|207687590|gb|GD668947.1|GD668947
genomic: AATGGGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGATTTTTTCCATGATGACAAGTCACAGAAAAAAG AATGCAACAACGTGACAATAGACTGGACEST: gi|192312176|gb|FK005661.1|FK005661
genomic: GGTGCTAGGCCAGGATTTTT-CCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagA-TGCAACA-CGTGACAAT-GACTGGAC
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAG ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTEST: gi|193357235|gb|FK321551.1|FK321551
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
EST: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAA-G ATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
genomic: GGTGCTAGGCCAGGATTTTTCCATGATGACAAGTCACAGAAAAAAGgtacaggttt ... ttgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATT
ttgttcaaaaggaagttgatgcagttttatttttctcatcccctattgcgaatagATGCAACACGTGACAATGACTGGACATGTCCAAAATGTGGCAATGTCAATTTTTCATTCAGAACTATCTGCAACATGAGAAAGTGCAACACACCCAAACC
agttgat putative branch site (score: 5)
ttttatttttctcatc putative PPT
ttttatttttctcat TA-rich tract