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gtgattatatgattcaatgtgtttttttttttcacatatcatatctatttggagtatatggaattttaatcttcattgttgatctggttcagTGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCTTGCAGGGATCTTGAATGGAGCAAAAGCTCTCCATGGTGACATACAGCAA
species | Glycine max |
transcript | GLYMA10G38680.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTATTCGCTGTTATAGCAG TGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCTEST: gi|151412885|gb|EV282697.1|EV282697
genomic: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTATTCGCTGTTATAGCAGgtgattatat ... tctggttcagTGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCT
EST: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTATTCGCTGTTATAGCAG TGGAGGCCGGACAATTGTATTTATCGAGACAAAAGAATGTGCTTCTCAGCTEST: gi|193315457|gb|FK278499.1|FK278499
genomic: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTATTCGCTGTTATAGCAGgtgattatat ... tctggttcagTGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCT
EST: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTATTCGCTGTTATAGCAG TGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTEST: gi|208060207|gb|GD856185.1|GD856185
genomic: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTATTCGCTGTTATAGCAGgtgattatat ... tctggttcagTGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCT
EST: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTGTTCGCTGTTATAGCAG TGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCT
genomic: AGTTCTGCCAGGGCCCAACTTATCCCAGATATTATTCGCTGTTATAGCAGgtgattatat ... tctggttcagTGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCT
atcatatctatttggagtatatggaattttaatcttcattgttgatctggttcagTGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCTTGCAGGGATCTTGAATGGAGCAAAAGCTCTCCATGGTGACATACAGCAA
tatatggaattttaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgattatatgattcaatgtgtttttttttttcacatatcatatctatttggagtatatggaattttaatcttcattgttgatctggttcagTGGAGGCCGGACAATTGTATTTACCGAGACAAAAGAATGTGCTTCTCAGCTTGCAGGGATCTTGAATGGAGCAAAAGCTCTCCATGGTGACATACAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA