Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttagtgtcaggaaaagtgtcacattgtatgtatacatatattttttgctagcatcactgcaatgtagtatgttaaactctgcagTTATCTTCCCTCGTCATGTCGAAGGCCAGAAACTGGATCGTACAGTATGGAATCTGTCAACTTTTCATGCCTATGTTAGCTATCATGTTAAG

Basic information

species Glycine max
transcript GLYMA08G32790.1
intron # 6
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254345503|gb|GR851665.1|GR851665
EST:     AGAAGTTCCCGCTGATGCATTATCTGCGAATGCAGGATTTGTGACATTTG                         TTATCTTCCCTCGTCATGTCGAAGGCCAGAAACTGGATCGTACAGTATGGA
genomic: AGAAGTTCCCGCTGATGCATTATCTGCGAATGCAGGATTTGTGACATTTGgttagtgtca ... aactctgcagTTATCTTCCCTCGTCATGTCGAAGGCCAGAAACTGGATCGTACAGTATGGA






















 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtatacatatattttttgctagcatcactgcaatgtagtatgttaaactctgcagTTATCTTCCCTCGTCATGTCGAAGGCCAGAAACTGGATCGTACAGTATGGAATCTGTCAACTTTTCATGCCTATGTTAGCTATCATGTTAAG
      atatattttttgcta  TA-rich tract