Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatttgattaatctagttgtgttgattctcttccccccgccccccttccccctgtttttttttttcctatgattgatgatctaattcttattcttttgttggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGCGCTTCGTCATAGAATACAACTTAATTGTTTGAGGCACAATATTCCTAGA

Basic information

species Glycine max
transcript GLYMA08G10910.2
intron # 6
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298180950|gb|HO022389.1|HO022389
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCA
EST: gi|8827548|gb|BE211278.1|BE211278
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACA
EST: gi|192311078|gb|FK004753.1|FK004753
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|298163564|gb|HO012297.1|HO012297
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAG
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAG
EST: gi|151396569|gb|EV266446.1|EV266446
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|31468876|gb|CD410904.1|CD410904
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|213601853|gb|DB982578.1|DB982578
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|209710236|gb|BW658932.1|BW658932
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|10845955|gb|BF068960.1|BF068960
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|192311077|gb|FK004752.1|FK004752
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|298163590|gb|HO012323.1|HO012323
EST:     GCCACGTAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACA
EST: gi|298191555|gb|HO039034.1|HO039034
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCA
EST: gi|19052522|gb|BM731189.1|BM731189
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|192334610|gb|FK025185.1|FK025185
EST:     GCCACATAGAGTTAATATTATCTGGAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|31461597|gb|CD403625.1|CD403625
EST:     GAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|19269677|gb|BM885933.1|BM885933
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCCAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|6725769|gb|AW310168.1|AW310168
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|5606061|gb|AI900159.1|AI900159
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAATGAG                         CCCGAGACTAAGTTAACAACA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACA
EST: gi|192330083|gb|FK020899.1|FK020899
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|23729429|gb|BU762800.1|BU762800
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCCAAGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCC-AAGC
EST: gi|209710235|gb|BW658931.1|BW658931
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|6095186|gb|AW119853.1|AW119853
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|8404300|gb|BE059934.1|BE059934
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTTACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|7029926|gb|AW459709.1|AW459709
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|9204377|gb|BE330601.1|BE330601
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|15201820|gb|BI425076.1|BI425076
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|24206126|gb|BU965379.1|BU965379
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|7234136|gb|AW569476.1|AW569476
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAAGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|208105582|gb|GD904663.1|GD904663
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|193603284|gb|FK554899.1|FK554899
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|10845617|gb|BF068696.1|BF068696
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAA
EST: gi|192315677|gb|FK011145.1|FK011145
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAA
EST: gi|18735395|gb|BM528740.1|BM528740
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|16106216|gb|BI893956.1|BI893956
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACA
EST: gi|193514113|gb|FK466551.1|FK466551
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|192330491|gb|FK021222.1|FK021222
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|31457887|gb|CD399915.1|CD399915
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|6567095|gb|AW234722.1|AW234722
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|192315678|gb|FK011146.1|FK011146
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|208199592|gb|GD996459.1|GD996459
EST:     GCCACATAGAGTTAATATTATCTGGAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|31476232|gb|CD418260.1|CD418260
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|7639381|gb|AW733705.1|AW733705
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|15662172|gb|BI699543.1|BI699543
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|21285671|gb|BQ473542.1|BQ473542
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|31309051|gb|CD394254.1|CD394254
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACTACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|7286001|gb|AW598488.1|AW598488
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|208174338|gb|GD968131.1|GD968131
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|151402923|gb|EV272736.1|EV272736
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|192318826|gb|FK011440.1|FK011440
EST:     GCCACATAGAGTTAATATTATTTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTTTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|18692893|gb|BM521741.1|BM521741
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCC
EST: gi|16347631|gb|BI973226.1|BI973226
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|151412368|gb|EV282180.1|EV282180
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGCGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|6915370|gb|AW396900.1|AW396900
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|193524827|gb|FK480108.1|FK480108
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|31306332|gb|CD391535.1|CD391535
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|192300035|gb|FG991853.1|FG991853
EST:     GCCACATAGAGTTAACATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|192318825|gb|FK011439.1|FK011439
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|12688125|gb|BG154461.1|BG154461
EST:     GCCACATAGAGTTTATATTATCTGAGAAAGAAGAACCTGTGAAGAAAGAG                         CCCGAGACTAAGTTAACCAACA-GCAAGAAATCCCCAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAAC-AACAAGCAAGAAATCCCAAGCT
EST: gi|209728753|gb|BW655433.1|BW655433
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|192330492|gb|FK021223.1|FK021223
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|38192672|gb|CF921878.1|CF921878
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|298165134|gb|HO011183.1|HO011183
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTA-CAACAAGCA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCA
EST: gi|58018390|gb|CX705132.1|CX705132
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|9204127|gb|BE330351.1|BE330351
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|12688134|gb|BG154470.1|BG154470
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|16282369|gb|BI944979.1|BI944979
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|12772975|gb|BG237902.1|BG237902
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|19270475|gb|BM886731.1|BM886731
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|208041817|gb|GD843533.1|GD843533
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|7590615|gb|AW706363.1|AW706363
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|16347772|gb|BI973367.1|BI973367
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGA
EST: gi|298176850|gb|HO026857.1|HO026857
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACA-CAAGCA
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCA
EST: gi|298175074|gb|HO018069.1|HO018069
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAG
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAG
EST: gi|31469618|gb|CD411646.1|CD411646
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|193721637|gb|FK661677.1|FK661677
EST:     CCACATAGAGTTAATATTATCTGAAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: CCACATAGAGTTAATATTATCTGAAAAA-GAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|6566246|gb|AW233927.1|AW233927
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCT
EST: gi|192330082|gb|FK020898.1|FK020898
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC
EST: gi|6134995|gb|AW133388.1|AW133388
EST:     GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAG                         CCCGAGACTAAGTTAACAACAA-CAAGAAATCCCAAGCTCTTCGAAGTGGC
genomic: GCCACATAGAGTTAATATTATCTGAAAAAGAAGAACCTGTGAAGAAGGAGgtatttgatt ... tggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttttttttttcctatgattgatgatctaattcttattcttttgttggtttgtagCCCGAGACTAAGTTAACAACAAGCAAGAAATCCCAAGCTCTTCGAAGTGGCGCTTCGTCATAGAATACAACTTAATTGTTTGAGGCACAATATTCCTAGA
                        atctaat  putative branch site (score: 3)
                              ttcttattcttttgtt  CT-rich tract
                           taattcttattctttt  TA-rich tract