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...aaatgtttcttgatttgtttgctaagatccttagcagtttaatggatttctgtttcaagctgatatgtattgatattttgaaactaaatttgattcccagGTATGTTCCATTCTTGATGAGACACTGCAAGCAGTTGGTGCTAAGGCAATGGTGGTTGGGCATACTCCTCAAACTATAGGTGTAAATTG
species | Glycine max |
transcript | GLYMA02G39710.1 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GTTTATACTCAAGAGACACACTAGATTTAGTGGACTATCAAGACAAACAG GTATGTTCCATTCTTGATGAGACACTGCAAGCAGTTGGTGCTAAGGCAATGEST: gi|16349369|gb|BI974964.1|BI974964
genomic: GTTTATACTCAAGAGACACACTAGATTTAGTGGACTATCAAGACAAACAGgtaagtctac ... tgattcccagGTATGTTCCATTCTTGATGAGACACTGCAAGCAGTTGGTGCTAAGGCAATG
EST: GTTTATACTCAAGAGACACACTAGATTTAGTGGACTATCAAGACAAACAG GTATGTTCCATTCTTGATGAGACACTGCAAGCAGTTGGTGCTAAGGCAATG
genomic: GTTTATACTCAAGAGACACACTAGATTTAGTGGACTATCAAGACAAACAGgtaagtctac ... tgattcccagGTATGTTCCATTCTTGATGAGACACTGCAAGCAGTTGGTGCTAAGGCAATG
atttctgtttcaagctgatatgtattgatattttgaaactaaatttgattcccagGTATGTTCCATTCTTGATGAGACACTGCAAGCAGTTGGTGCTAAGGCAATGGTGGTTGGGCATACTCCTCAAACTATAGGTGTAAATTG
ttccc CT-rich tract
atatgtattgatattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aaatgtttcttgatttgtttgctaagatccttagcagtttaatggatttctgtttcaagctgatatgtattgatattttgaaactaaatttgattcccagGTATGTTCCATTCTTGATGAGACACTGCAAGCAGTTGGTGCTAAGGCAATGGTGGTTGGGCATACTCCTCAAACTATAGGTGTAAATTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - -tgtttgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - gctgata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaactaa