1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...aatttctagaattatgttcacaaaattagataggggcagaatgaagcagagatactgagaatgatcatttgcagcatgtcatttttttttgtttcaacagGCTGAAGTTGGAAGACATGTGGTTGGAGATCGCGAGTGGGAAGTTTATAGAATCTTGCTTGATGAAGGGGATGGTTTATCTGTTCCAAGGAACAAGATTG
species | Glycine max |
transcript | GLYMA19G36910.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
gcagagatactgagaatgatcatttgcagcatgtcatttttttttgtttcaacagGCTGAAGTTGGAAGACATGTGGTTGGAGATCGCGAGTGGGAAGTTTATAGAATCTTGCTTGATGAAGGGGATGGTTTATCTGTTCCAAGGAACAAGATTG
tcatttttttttgttt CT-rich tract
atttttttttgtttca TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aatttctagaattatgttcacaaaattagataggggcagaatgaagcagagatactgagaatgatcatttgcagcatgtcatttttttttgtttcaacagGCTGAAGTTGGAAGACATGTGGTTGGAGATCGCGAGTGGGAAGTTTATAGAATCTTGCTTGATGAAGGGGATGGTTTATCTGTTCCAAGGAACAAGATTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - tgttcac
- - - - - - - - - - - - - - - - ggggcag
- - - - - - - - - - - - - - - - - - - -aatgaag
- - - - - - - - - - - - - - - - - - - - - - - - - gatactg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcagca