1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtatgtatatttaacagttgtataagatgaggattctatttacactccccggtagattcttgcattgtgtttctaagaaggttgatgtttctatgatgttcttacagGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTTTTAAATCTGGT
species | Glycine max |
transcript | GLYMA19G05900.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTG GCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACTEST: gi|17964676|gb|BM271407.1|BM271407
genomic: TAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTGgtatgtatat ... gttcttacagGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACT
EST: CAGTTGGATTCAATATGCTCAAATGAACTTG GCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACTEST: gi|51336477|gb|CO980343.1|CO980343
genomic: CAGTTGGATTCAATATGCTCAAATGAACTTGgtatgtatat ... gttcttacagGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACT
EST: TAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTG GCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACTEST: gi|19346035|gb|BM890915.1|BM890915
genomic: TAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTGgtatgtatat ... gttcttacagGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACT
EST: GTTGGATTCAATATGCTCAAATGAACTTG GCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACTEST: gi|31471379|gb|CD413407.1|CD413407
genomic: GTTGGATTCAATATGCTCAAATGAACTTGgtatgtatat ... gttcttacagGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACT
EST: TAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTG GCAATCCAGATGTCATTTCAAATGTACTCGGGTAGAGTAGGATGTAAAACA
genomic: TAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTGgtatgtatat ... gttcttacagGCAATCCAGATGTCATTTCAAATGTACT-GGGTAGAG-AGGATGTAAAACA
tagattcttgcattgtgtttctaagaaggttgatgtttctatgatgttcttacagGCAATCCAGATGTCATTTCAAATGTACTGGGTAGAGAGGATGTAAAACACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTTTTAAATCTGGT
ggttgat putative branch site (score: 5)
tgttctt putative PPT
tttctaa TA-rich tract