1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
taagctaggtttcttaaattatgaaaatggttaattaaattgcttatagtatcttagaagtaattaattaattaacaagctgaattgttcaactgtggacacacattaattaaattgcttatatcatgaattgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATGGAGTGGCATTGCTTGGTTGGTAGGGATGACTGTGTTCATTGCTGTGTT
species | Glycine max |
transcript | GLYMA18G43000.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAANAACAAGCTGTGATTGGATTATEST: gi|193645888|gb|FK593873.1|FK593873
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: TTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|207684228|gb|GD664579.1|GD664579
genomic: TTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|120530398|gb|EH258531.1|EH258531
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|208069183|gb|GD870001.1|GD870001
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: TTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|26047871|gb|CA784524.1|CA784524
genomic: TTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|208066695|gb|GD863554.1|GD863554
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|208165342|gb|GD964450.1|GD964450
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTTGTAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTEST: gi|26048877|gb|CA785330.1|CA785330
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGT-G-AGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|193525030|gb|FK482831.1|FK482831
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: GCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|6913524|gb|AW395054.1|AW395054
genomic: GCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: GTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|208166460|gb|GD965526.1|GD965526
genomic: GTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|207694981|gb|GD677064.1|GD677064
genomic: CAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATEST: gi|193667048|gb|FK612548.1|FK612548
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAEST: gi|6952300|gb|AW424368.1|AW424368
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAA
EST: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATG AGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
genomic: CATTGTCTTTCAACTGTGGACACACAGGCAGTTATTTGAAGCCGAAGATGtaagctaggt ... attgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTAT
ttgttcaactgtggacacacattaattaaattgcttatatcatgaattgttcaggAGGGTGAGGATGGTGAGGACGGTGAAGAAGAACAAGCTGTGATTGGATTATGGAGTGGCATTGCTTGGTTGGTAGGGATGACTGTGTTCATTGCTGTGTT
cattaat putative branch site (score: 3)
attaattaaattgctt TA-rich tract