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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtagtgtgacactttctattgtattagttttctatttcaaggggaatatggactgatatggtgtgaactttggagcgttatattcaaatttctgttagcttcctaatcttttttatttcaatttatttagGAACCCCCGGTTTTTGGAAAGGGGACTACAATCAATGACCCCCCATCTGG

Basic information

species Glycine max
transcript GLYMA14G38490.1
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgttatattcaaatttctgttagcttcctaatcttttttatttcaatttatttagGAACCCCCGGTTTTTGGAAAGGGGACTACAATCAATGACCCCCCATCTGG
                         tcctaat  putative branch site (score: 2)
                                              tttattt  putative PPT
                        ttcctaatctttttta  TA-rich tract