Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatttatcagtttgctttgctgtttgtgccaaagtgcatttttttttctcagcattgtaatttaattggttgtatattttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTCCGTGCACTCCTTGATGTTGGTCTTGTTAGGACTACAACAGGAAATCGCG

Basic information

species Glycine max
transcript GLYMA13G35590.1
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA13G35580.2 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM5G815894_T03 (Zea mays), 3'ss of exon 5
gtatttatcagtttgctttgctgtttgtgccaaagtgcatttttttttctcagcattgtaatttaattggttgtatattttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTCCGTGCACTCCTTGATGTTGGTCTTGTTAGGACTACAACAGGAAATCGCG
     ||  | ||||  |   | |   |   |   |    |  | |  |   |  | |  |||||  | |||   | |  |   |||||| ||||| ||||| |  || || || || || ||    |||||||| |||||||| ||| | |||||||| ||| ||||||||||||| || || || |
----gtaa-aatttggctaaatttcgatcttattttttgctgatgtcacattggttgggcatttatattgtttcttttcgttcatcagGCCACTGGTGAGGACTTCTCTGTTGAGCCAGCTGATGAGAGGAGGCCTTTCCGTGCTCTCTTGGATGTTGGCCTTATTAGGACTACAACTGGGAACCGTG

upper sequence: GLYMA13G35580.2 (Glycine max), 3'ss of exon 5
lower sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 5
gtatttatcagtttgctttgctgtttgtgccaaagtgcatttttttttctcagcattgtaatttaattggttgtatattttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTCCGTGCACTCCTTGATGTTGGTCTTGTTAGGACTACAACAGGAAATCGCG
|||    |  |     | |    | | |     | |   |  | ||   |  |  | ||| ||     |||| | | | ||   |||||| ||||| ||||| |  || || || || || ||    |||||||| |||||||| ||| | |||||||| ||| | |||||||||||||| || || |
gtaaaatttggccaaatatataatct-tattttaatatctgatgttgcattggtttggtatttctgacggttctttttgtt-catcagGCCACTGGTGAGGACTTCTCTGTTGAGCCAGCTGATGAGAGGAGGCCTTTCCGTGCTCTCTTGGATGTTGGCCTTATCAGGACTACAACAGGGAACCGTG

upper sequence: GLYMA13G35580.2 (Glycine max), 3'ss of exon 5
lower sequence: Vv05s0094g00870.t01 (Vitis vinifera), 3'ss of exon 5
---------------------gtatttatcagtttgctttgctgtttgtgccaaagtgcatttttttttctcagcattgtaatttaattggttgtatattttat--------------ttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTCCGTGCACTCCTTGATGTTGGTCTTGTTAGGACTACAACAGGAAATCGCG
                     |  ||  |    || | | | |  |||  |  |||      || || | | |  || ||| |||   || |    ||| | ||               | |||| ||||| |||||||| || || |||||  | || |||||||||||||||||||| || ||||||||||| ||||| || || ||||| || || || |
gtacaattgttagatatctgtgctttccttttctttcatggtttcttggtctcaaggttggcttgttctgtaaagat-gtagttttgatgatcacttatctgatgcgtacttgtacttcttagGCAACTGGTGAGGATTACTCTGTTGAACCCACAGATAGCAGGAGGCCATTCCGTGCCCTTCTTGATGTTGGGCTTGTGAGAACAACAACTGGCAACCGTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298179265|gb|HO027736.1|HO027736
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|13181447|gb|BG352787.1|BG352787
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAAGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|38192902|gb|CF922108.1|CF922108
EST:     GAGTCCTCAAAACACTTGAAATGGATGATGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298175002|gb|HO017997.1|HO017997
EST:     GAGTCCTCAAAACACTCGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|26058921|gb|CA801835.1|CA801835
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|193550674|gb|FK508929.1|FK508929
EST:     GAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|42722709|gb|CK768608.1|CK768608
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|37993992|gb|CF805738.1|CF805738
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298185668|gb|HO030881.1|HO030881
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|209721139|gb|BW665696.1|BW665696
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213588681|gb|DB957689.1|DB957689
EST:     GAGTCCTCAGAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213593969|gb|DB961913.1|DB961913
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|15203735|gb|BI426503.1|BI426503
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|37993873|gb|CF805619.1|CF805619
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|19452678|gb|BM954088.1|BM954088
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213611688|gb|DB969076.1|DB969076
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|17153260|gb|BM143193.1|BM143193
EST:     GAGTCCTCAAAACTTTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|7326863|gb|AW620661.1|AW620661
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|15812318|gb|BI784593.1|BI784593
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|8282845|gb|BE020406.1|BE020406
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|192305243|gb|FG993981.1|FG993981
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|7590367|gb|AW706121.1|AW706121
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|209711827|gb|BW674087.1|BW674087
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|9900404|gb|BE609372.1|BE609372
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCATTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213608827|gb|DB957191.1|DB957191
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|23727797|gb|BU761934.1|BU761934
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|18733428|gb|BM527602.1|BM527602
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|254328305|gb|GR835270.1|GR835270
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298195414|gb|HO039245.1|HO039245
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGA
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGA
EST: gi|6072796|gb|AW102183.1|AW102183
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|254332683|gb|GR844053.1|GR844053
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|163921337|gb|EH039759.1|EH039759
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|13312780|gb|BG406431.1|BG406431
EST:     TATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: TATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298177039|gb|HO023400.1|HO023400
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|19269197|gb|BM885453.1|BM885453
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|20498035|gb|BQ272965.1|BQ272965
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|46492910|gb|CN472466.1|CN472466
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCG
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCG
EST: gi|8284697|gb|BE022239.1|BE022239
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|23731241|gb|BU763733.1|BU763733
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|13562903|gb|BG551123.1|BG551123
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|254331588|gb|GR846005.1|GR846005
EST:     GTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|14125882|gb|BG790320.1|BG790320
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|4286000|gb|AI440984.1|AI440984
EST:     AGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAAATGTTGAG                         GCTACTGGAGAGGATTATTTCAGTGGAACCTGCCGAGAGCAGGAG
genomic: AGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAA-TGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATT-CAGTGGAACCTGCCGAGAGCAGGAG
EST: gi|192318939|gb|FK006835.1|FK006835
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAATATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|38192978|gb|CF922184.1|CF922184
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|11412751|gb|BF424762.1|BF424762
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213607717|gb|DB958736.1|DB958736
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|209710634|gb|BW671006.1|BW671006
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|7326861|gb|AW620659.1|AW620659
EST:     GAGTCCTCAAAACACTTGAAATGGATGAAGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|18692881|gb|BM521729.1|BM521729
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|9440322|gb|BE440829.1|BE440829
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|15812394|gb|BI784669.1|BI784669
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|254316214|gb|GR827751.1|GR827751
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298183188|gb|HO028451.1|HO028451
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|48575154|gb|CO036261.1|CO036261
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|17022274|gb|BM093308.1|BM093308
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|18040880|gb|BM309174.1|BM309174
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|208298056|gb|GE091031.1|GE091031
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213614228|gb|DB956812.1|DB956812
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|24205594|gb|BU964847.1|BU964847
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|193626317|gb|FK572681.1|FK572681
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|18041137|gb|BM309431.1|BM309431
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|209716540|gb|BW653902.1|BW653902
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298183179|gb|HO028442.1|HO028442
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213601355|gb|DB956675.1|DB956675
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGANATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298183338|gb|HO028551.1|HO028551
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAG
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAG
EST: gi|254320081|gb|GR830997.1|GR830997
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAG-AG-CCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|209710047|gb|BW681039.1|BW681039
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGANATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAG
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAG
EST: gi|208306628|gb|GE106695.1|GE106695
EST:     AGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: AGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|254319372|gb|GR828992.1|GR828992
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|6070850|gb|AW100237.1|AW100237
EST:     GAGTCCTCANAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|298185362|gb|HO030575.1|HO030575
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|213617258|gb|DB972896.1|DB972896
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|208340211|gb|GE135787.1|GE135787
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|7590322|gb|AW706077.1|AW706077
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTACGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
EST: gi|26267787|gb|CA818850.1|CA818850
EST:     GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAG                         GCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC
genomic: GAGTCCTCAAAACACTTGAAATGGATGAGGAGTATGAAGGAAATGTTGAGgtatttatca ... tttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agtgcatttttttttctcagcattgtaatttaattggttgtatattttatttcagGCTACTGGAGAGGATTATTCAGTGGAACCTGCCGAGAGCAGGAGGCCATTCCGTGCACTCCTTGATGTTGGTCTTGTTAGGACTACAACAGGAAATCGCG
                           atttaat  putative branch site (score: 4)
                                            ttttatttc  putative PPT
                     attgtaatttaattgg  TA-rich tract