1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...cctccaactttggtcaacatataaacatggatgaaacaatttaaacttttttctggtaattatttcttcaaaattacacaatttttcttatgttttgcagAGTCCAGATGGGTTAACAGTGGTGTCAGCTGGGGCAGATGAAAGTCTTCGCTTTTGGGATGTGTTTGGGCCACCT
species | Glycine max |
transcript | GLYMA10G22670.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
cttttttctggtaattatttcttcaaaattacacaatttttcttatgttttgcagAGTCCAGATGGGTTAACAGTGGTGTCAGCTGGGGCAGATGAAAGTCTTCGCTTTTGGGATGTGTTTGGGCCACCT
tttttcttatgtttt CT-rich tract
taattatttcttcaaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cctccaactttggtcaacatataaacatggatgaaacaatttaaacttttttctggtaattatttcttcaaaattacacaatttttcttatgttttgcagAGTCCAGATGGGTTAACAGTGGTGTCAGCTGGGGCAGATGAAAGTCTTCGCTTTTGGGATGTGTTTGGGCCACCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
-ctccaac
- - - - - - - - - - - - -catggat
- - - - - - - - - - - - - - - - gaaacaat