1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...atgtttctctatattaacgtatagatctcttcatccctgtaatgataagaaacaggagtattttaaagattctttttctttttttattgatctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCGCTTCATAGTGATGATCGCTACTTGGCTGAGCCAGCACTGGACACTGTG
species | Glycine max |
transcript | GLYMA08G13300.3 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|207734492|gb|GD712443.1|GD712443
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|163927330|gb|EH040145.1|EH040145
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|151394091|gb|EV263962.1|EV263962
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACGCTATAGACTTCATTGGTCATGCTTTGGCEST: gi|192326977|gb|FK019239.1|FK019239
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|4283991|gb|AI440725.1|AI440725
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: TTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|192328654|gb|FK023154.1|FK023154
genomic: TTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|24136625|gb|BU927135.1|BU927135
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|151407978|gb|EV277793.1|EV277793
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACCATAGACTTCATTGGTCATGCTTTGGCEST: gi|151411945|gb|EV281756.1|EV281756
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|192327650|gb|FK020669.1|FK020669
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGATGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|254321748|gb|GR825065.1|GR825065
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCEST: gi|120532856|gb|EH260989.1|EH260989
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
EST: ATGAAGGGATGGAAAACCTTGACAAGAGTGACTACTAAAGAGTTGATAGC AAAATACGGCTCTTGGATGATAACACTATAGACTTCATTGGGTCAATGCTTEST: gi|8826330|gb|BE210060.1|BE210060
genomic: ATGAAGGGATGGA---C-TTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGG-TCTTG-ATGATAACACTATAGACTTCATTGG-TCA-TGCTT
EST: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGC ACAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTGTGGC
genomic: ACCCATGAAGGGATGGACTTGACAAGAGTGACTACTAAAGAGTTGATAGCgtatgtgtac ... tctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGC
taagaaacaggagtattttaaagattctttttctttttttattgatctgtgacagAAAATACGGTCTTGATGATAACACTATAGACTTCATTGGTCATGCTTTGGCGCTTCATAGTGATGATCGCTACTTGGCTGAGCCAGCACTGGACACTGTG
tattgat putative branch site (score: 3)
ttctttttcttttttt CT-rich tract
agtattttaaagattc TA-rich tract