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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacttttgtatttttctttcctgagcagcagggaatattttaaggttatatatgctagcttccacaaactgttacttaagtttctattgatttccagGCAAACAACATTGATCTTTACATAAATGGACACGATCACTGCCTACAACACATAAGCAGTTTTGACAG

Basic information

species Glycine max
transcript GLYMA08G09880.1
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aggttatatatgctagcttccacaaactgttacttaagtttctattgatttccagGCAAACAACATTGATCTTTACATAAATGGACACGATCACTGCCTACAACACATAAGCAGTTTTGACAG
                                          tattgat  putative branch site (score: 3)
                                      tttctatt  CT-rich tract
                                          tattgattt  TA-rich tract