1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ctcttgggaaaggggtttaaggttaatacttttaaggggtgaacgggttaaccatgtctaacgactagattcttatgaaatttcttgctccttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATTGTTTGGTTACCGCTGGAATGTTAATATCCCAAAGCAAAAGCTTTGTCT
species | Glycine max |
transcript | GLYMA08G02390.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGA-GATTT-GATTGTATEST: gi|33388901|gb|CA852108.1|CA852108
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|207730189|gb|GD706923.1|GD706923
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: GATGTAGTGTTCCGTAAAAAGCTTCCAGAG ATCCGAAATCAGCTCTTTGGACAAGTTGTTGCTTGAAGATTTTGATTGTATEST: gi|192304326|gb|FG996452.1|FG996452
genomic: GATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|209726265|gb|BW680202.1|BW680202
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|208270211|gb|GE069063.1|GE069063
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: CGTCTTGATGTAGTTTTCCGT-AAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193383548|gb|FK346795.1|FK346795
genomic: CGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATGTAGTTTTCCGT-AAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|254344833|gb|GR855597.1|GR855597
genomic: ATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|120493334|gb|EH221501.1|EH221501
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGATCTTTGGACAAEST: gi|209729717|gb|BW669817.1|BW669817
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAA
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|31309154|gb|CD394357.1|CD394357
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193404291|gb|FK367815.1|FK367815
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCCTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193326093|gb|FK288180.1|FK288180
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|209700830|gb|BW661261.1|BW661261
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|192304325|gb|FG996451.1|FG996451
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: -TACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAA-GCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|192327865|gb|FK022438.1|FK022438
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|120533850|gb|EH261983.1|EH261983
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGATCTTTGGACAAATTGTTGCTTGAAGATTT-GATCGTATEST: gi|11689161|gb|BF596837.1|BF596837
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTCTGATTGTATEST: gi|21995201|gb|BQ786729.1|BQ786729
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193308323|gb|FK277314.1|FK277314
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: TTGATGTAGTTTTCCGTTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|31311729|gb|CD396932.1|CD396932
genomic: TTGATGTAGTTTTCCG-TAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|31307235|gb|CD392438.1|CD392438
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|21286054|gb|BQ473925.1|BQ473925
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|209716816|gb|BW682258.1|BW682258
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|208159383|gb|GD954278.1|GD954278
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|209720340|gb|BW669274.1|BW669274
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|208161265|gb|GD963439.1|GD963439
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193560285|gb|FK516736.1|FK516736
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|254342000|gb|GR853137.1|GR853137
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|31475693|gb|CD417721.1|CD417721
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193405648|gb|FK374733.1|FK374733
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: TTGATGTAGTTTTCCGTTAAAAAGACTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAEST: gi|120493248|gb|EH221415.1|EH221415
genomic: TTGATGTAGTTTTCCG-TAAAAAG-CTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTA
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|192331491|gb|FK022738.1|FK022738
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: -TACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAA-GCTTCCAGAG ATCCGAAAGCAGCTCTTTGEST: gi|254338603|gb|GR845746.1|GR845746
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTG
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|8827772|gb|BE211502.1|BE211502
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTACAACGCTTCCAGAG ATCCGGAAGCAGCTCTTTGGACAEST: gi|193577261|gb|FK537506.1|FK537506
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACA
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|9203280|gb|BE329504.1|BE329504
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|207829624|gb|GD803192.1|GD803192
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|18733251|gb|BM527503.1|BM527503
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|254338602|gb|GR845745.1|GR845745
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193394107|gb|FK360254.1|FK360254
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: TTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|23728894|gb|BU762516.1|BU762516
genomic: TTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGEST: gi|193336898|gb|FK302376.1|FK302376
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAG
EST: TTGATGTAGTTTTCCGTTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|151393563|gb|EV263438.1|EV263438
genomic: TTGATGTAGTTTTCCG-TAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|26047921|gb|CA784561.1|CA784561
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTEST: gi|38192295|gb|CF921501.1|CF921501
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|57575472|gb|CX548447.1|CX548447
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|193347738|gb|FK313498.1|FK313498
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: TTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|13563524|gb|BG551744.1|BG551744
genomic: TTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGEST: gi|31464448|gb|CD406476.1|CD406476
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTG
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|31470486|gb|CD412514.1|CD412514
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATEST: gi|254344832|gb|GR855596.1|GR855596
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
EST: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAA-GCTTCCAGAG ATCCGAAAGCAGCTCTTTGGACAAATTGT-GCTTGA-GATTTTGAT-GTAT
genomic: ATACACTTGATGCACGTCTTGATGTAGTTTTCCGTAAAAAGCTTCCAGAGgtaaaaaaga ... cttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTAT
ggttaaccatgtctaacgactagattcttatgaaatttcttgctccttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATTGTTTGGTTACCGCTGGAATGTTAATATCCCAAAGCAAAAGCTTTGTCT
gtctaac putative branch site (score: 2)
tttcttgctccttatt putative PPT
attcttatgaaattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ctcttgggaaaggggtttaaggttaatacttttaaggggtgaacgggttaaccatgtctaacgactagattcttatgaaatttcttgctccttattgcagATCCGAAAGCAGCTCTTTGGACAAATTGTTGCTTGAAGATTTTGATTGTATTGTTTGGTTACCGCTGGAATGTTAATATCCCAAAGCAAAAGCTTTGTCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - -ggggttt
- - - - - - - - - - - - - - - - - aggggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - catgtct