1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gttggttcatctttggtgatgtgttcttgtttataggaagaatctgtaaagaattgttctcaacagcccaaggaaagcggaatatgtttttattggtctgtaatgaattggtctcattgactttttgtttatgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTGAGGTGAATGATGAGGATGATGACGAGGAAGGCAGTGGCGAG
species | Glycine max |
transcript | GLYMA04G01840.8 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193353946|gb|FK322024.1|FK322024
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: TGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|192328173|gb|FK022867.1|FK022867
genomic: TGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207815801|gb|GD787006.1|GD787006
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: CTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207706400|gb|GD687018.1|GD687018
genomic: CTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: TGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208219062|gb|GE015792.1|GE015792
genomic: TGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: GTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAAGAAGAATCTGEST: gi|207833693|gb|GD807610.1|GD807610
genomic: GTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAA-GAAGAATCTG
EST: ACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|5677177|gb|AI938307.1|AI938307
genomic: ACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193310302|gb|FK274128.1|FK274128
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGTAAGAATCTGAGAAGTCCGTATCEST: gi|207842828|gb|GD816024.1|GD816024
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAG-AAGAATCTGAGAAGTCTGTATC
EST: AAAGGAAAGNGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193509522|gb|FK471130.1|FK471130
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207837887|gb|GD813329.1|GD813329
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: TAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193385381|gb|FK350687.1|FK350687
genomic: TAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGG-AAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|6071409|gb|AW100796.1|AW100796
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208252071|gb|GE049290.1|GE049290
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGG-AAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GC-GAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207796068|gb|GD769305.1|GD769305
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208264914|gb|GE063450.1|GE063450
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: GAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208126990|gb|GD926150.1|GD926150
genomic: GAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: GAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207714164|gb|GD694943.1|GD694943
genomic: GAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193665032|gb|FK611706.1|FK611706
genomic: AGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208111947|gb|GD912381.1|GD912381
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207755383|gb|GD729418.1|GD729418
genomic: AGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: GTACGAGAAGAACATGAGAGCTTATAACAAGAAAACAAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCEST: gi|7639106|gb|AW733436.1|AW733436
genomic: GTACGAGAAGAACATGAGAGCTTATAACAAG-AAAC-AGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATC
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|214006236|gb|DB989505.1|DB989505
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATTTTAAGAAACAG GCGGAAGATCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193698958|gb|FK641233.1|FK641233
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207694525|gb|GD678708.1|GD678708
genomic: AGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCCTATAACAAGAAACAG GCGGAAGGTCCTACTAGGTGGGGATGAAGAAEST: gi|208093265|gb|GD895216.1|GD895216
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACT-GGTGGGGATGAAGAA
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|22929644|gb|BU546783.1|BU546783
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|13791429|gb|BG654020.1|BG654020
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193632584|gb|FK580516.1|FK580516
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGGGAAGTCTGTATCTEST: gi|21256663|gb|BQ453551.1|BQ453551
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193347508|gb|FK312274.1|FK312274
genomic: AAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: ATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCEST: gi|193372223|gb|FK335440.1|FK335440
genomic: ATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATC
EST: ATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193381153|gb|FK348354.1|FK348354
genomic: ATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCCGTATCTEST: gi|208080576|gb|GD875014.1|GD875014
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193335490|gb|FK300190.1|FK300190
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: CGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCEST: gi|193656324|gb|FK603692.1|FK603692
genomic: CGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAA-GGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATC
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207716057|gb|GD698427.1|GD698427
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: GAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|21993807|gb|BQ785335.1|BQ785335
genomic: GAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207824372|gb|GD795860.1|GD795860
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGCCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|105631896|gb|DW246230.1|DW246230
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: ACGAGAAGACCATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193343104|gb|FK305698.1|FK305698
genomic: ACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: CGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193349046|gb|FK315280.1|FK315280
genomic: CGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: TGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208110333|gb|GD911789.1|GD911789
genomic: TGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|31309231|gb|CD394434.1|CD394434
genomic: AAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207796834|gb|GD768896.1|GD768896
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: GGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208078996|gb|GD876612.1|GD876612
genomic: GGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATEST: gi|13791012|gb|BG653603.1|BG653603
genomic: AACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTAT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193694905|gb|FK632975.1|FK632975
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AACAAGAAGCAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207845337|gb|GD814934.1|GD814934
genomic: AACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: GAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193619919|gb|FK567156.1|FK567156
genomic: GAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTCGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCEST: gi|214006650|gb|DB986401.1|DB986401
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACT-GGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATC
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTAGCTEST: gi|193687414|gb|FK633959.1|FK633959
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193371946|gb|FK334169.1|FK334169
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|31307136|gb|CD392339.1|CD392339
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACTAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207840857|gb|GD810154.1|GD810154
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCCGTATCTEST: gi|193729351|gb|FK667265.1|FK667265
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAGGAAAGTTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207769704|gb|GD741290.1|GD741290
genomic: AAGGAAAG-TGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208224913|gb|GE026298.1|GE026298
genomic: AGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCCTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGEST: gi|208250958|gb|GE050067.1|GE050067
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATG
EST: AAAGGAAAGTGGAGTACGAGAAGGACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|15000980|gb|BI321794.1|BI321794
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193723362|gb|FK661410.1|FK661410
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCEST: gi|208271393|gb|GE072599.1|GE072599
genomic: AAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAAC-AAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATC
EST: GGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207758058|gb|GD727782.1|GD727782
genomic: GGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|8402629|gb|BE058263.1|BE058263
genomic: AGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207802749|gb|GD772646.1|GD772646
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGEST: gi|9205416|gb|BE331640.1|BE331640
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTG
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193716839|gb|FK649413.1|FK649413
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193655955|gb|FK606627.1|FK606627
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193304698|gb|FK272183.1|FK272183
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCCTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207829966|gb|GD801882.1|GD801882
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: CTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|193681755|gb|FK622461.1|FK622461
genomic: CTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AACAAGAAACAG GCGGTAAGGTTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATEST: gi|208282518|gb|GE076472.1|GE076472
genomic: AACAAGAAACAGgttggttcat ... atgttgtcagGCGG-AAGG-TCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTAT
EST: AAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GC-GAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|31475100|gb|CD417128.1|CD417128
genomic: AAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAACTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATTTGAGAAGTCTGTATCTEST: gi|9984278|gb|BE658386.1|BE658386
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|207682257|gb|GD667162.1|GD667162
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTACAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTEST: gi|208204683|gb|GE007866.1|GE007866
genomic: AAAGGAAAGTGGAGTACGAGAAGAACATGAGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
EST: AGAGCTTATAACAAGAAACAG GCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
genomic: AGAGCTTATAACAAGAAACAGgttggttcat ... atgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCT
gtttttattggtctgtaatgaattggtctcattgactttttgtttatgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTGAGGTGAATGATGAGGATGATGACGAGGAAGGCAGTGGCGAG
cattgac putative branch site (score: 3)
tttttgtttatgtt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttggttcatctttggtgatgtgttcttgtttataggaagaatctgtaaagaattgttctcaacagcccaaggaaagcggaatatgtttttattggtctgtaatgaattggtctcattgactttttgtttatgttgtcagGCGGAAGGTCCTACTGGTGGGGATGAAGAAGAATCTGAGAAGTCTGTATCTGAGGTGAATGATGAGGATGATGACGAGGAAGGCAGTGGCGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG