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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatttaattttgtgttttagacagccaaacttattccaattaattttgttgcagGTCAGCCCCGAGCTCTACGGGGACAGATACCCGAGATTCTTTACGTATTGGACG

Basic information

species Glycine max
transcript GLYMA01G03390.1
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtatttaattttgtgttttagacagccaaacttattccaattaattttgttgcagGTCAGCCCCGAGCTCTACGGGGACAGATACCCGAGATTCTTTACGTATTGGACG
                                      aattaat  putative branch site (score: 3)
                                            ttttgtt  CT-rich tract
                           aaacttattccaatta  TA-rich tract