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gtaagttcctttttatttagaagacattgtagagcttgtatagcctatacctaataacccataaaattatttgttgtatcgattaaaacaactaataatggttcttggcagACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAAACTACTAATCACTATTCAAGTCTTCAAATAACCACAACAAGAGAA
species | Glycine max |
transcript | GLYMA19G30460.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CAACTGTCATTCACGGGTGTTGATGTTATAAAAGTGGCATCTAGTAGAAG ACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCEST: gi|193306339|gb|FK273320.1|FK273320
genomic: CAACTGTCATTCACGGGTGTTGATGTTATAAAAGTGGCATCTAGTAGAAGgtaagttcct ... ttcttggcagACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGC
EST: CAACTGTCATTCACGGGTGTTGATGTTATAAAAGTGGCATCTAGTAGAAG ACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCEST: gi|193605534|gb|FK557324.1|FK557324
genomic: CAACTGTCATTCACGGGTGTTGATGTTATAAAAGTGGCATCTAGTAGAAGgtaagttcct ... ttcttggcagACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGC
EST: TGTTGATGTTATAAAAGTGGCATCTAGTAGAAG ACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCEST: gi|208063849|gb|GD864215.1|GD864215
genomic: TGTTGATGTTATAAAAGTGGCATCTAGTAGAAGgtaagttcct ... ttcttggcagACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGC
EST: GTGGCATCTAGTAGAAG ACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGC
genomic: GTGGCATCTAGTAGAAGgtaagttcct ... ttcttggcagACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGC
acccataaaattatttgttgtatcgattaaaacaactaataatggttcttggcagACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAAACTACTAATCACTATTCAAGTCTTCAAATAACCACAACAAGAGAA
ttctt CT-rich tract
taaaattatttgttgt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagttcctttttatttagaagacattgtagagcttgtatagcctatacctaataacccataaaattatttgttgtatcgattaaaacaactaataatggttcttggcagACATGTTTATGGAGATGGAAAATGGAAAAGGGTGGAGACAATAGTGGAAGCAAAAACTACTAATCACTATTCAAGTCTTCAAATAACCACAACAAGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA