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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC

Basic information

species Glycine max
transcript GLYMA19G28240.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: LOC_Os04g38600.2 (Oryza sativa), 3'ss of exon 3
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatga--cagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
           || |   |||  |   | |  | |   ||        ||  |  || |||||      |   |  |||   ||   ||||| |||   |||| ||||||||||| || ||||||||||| |||||||||||||| ||||| ||||| || || |||||||||||||||||  |||| ||  | || || ||
----------gtacgtgcgca-cacgcgcgcatcagcgatcctcgaccaa--ttttactctctctctctctctctgatgcttaac--caatcaatggcgcagGCATCATCAAGGGGACGATGACCACCACCCACTCCTACACCGGCGACCAGAGGCTGCTCGACGCGAGCCACCGTGACCTCCGGCGCGCGCGTGCGGCGGC

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G162845_T01 (Zea mays), 3'ss of exon 3
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
    | || ||| | |   ||| | |  |    ||   ||  | |     |     || |||  |  |    | ||  |            ||||  |||| ||||||||||| |||||||||||||| |||| ||||||| | ||||| ||||| || || ||||||||||| |||||| | || ||  | || || ||
-gtgagtgccttcttcgctcaa-actcaaactcaaaccatacgtaacggcgcatgcatactcatccgtcaccgtcaccg------------ccatcgcagGCATCATCAAGGGCACCATGACCACCACCCACTTCTACACCTGCGACCAGAGGCTGCTGGACGCGAGCCACCGCGACCTGCGCCGCGCCCGCGCCGCCGC

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G039723_T01 (Zea mays), 3'ss of exon 3
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
      || ||| | |   ||| | |  |    ||   ||  | |     |     || |||  |  |    | ||  |            |||   |||| ||||||||||| |||||||||||||| |||| ||||||| | ||||| ||||| || || ||||||||||| |||||| | || ||  | || || ||
-gtgcgtgccttcttcgctcaa-actcaaactcaaaccatacgtaacggcgcatgcatactcatccgtcaccgtcaccg------------ccaccgcagGCATCATCAAGGGCACCATGACCACCACCCACTTCTACACCTGCGACCAGAGGCTGCTGGACGCGAGCCACCGCGACCTGCGCCGCGCCCGCGCCGCCGC

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM5G821433_T01 (Zea mays), 3'ss of exon 2
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
             ||| | |     |  |    ||   ||  | |     |     || |||  |  |    | ||  |            |||   |||| ||||||||||| |||||||||||||| |||| ||||||| | || || ||||| || || ||||||||||| |||||| | || ||  | || || ||
--------gtgcgtgccttcttcgctcaaactcaaaccatacgtaacggcgcatgcatactcatccgtcaccgtcaccg------------ccaccgcagGCATCATCAAGGGCACCATGACCACCACCCACTTCTACACCTGCGATCAGAGGCTGCTGGACGCGAGCCACCGCGACCTGCGCCGCGCCCGCGCCGCCGC

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: AT3G26650.1 (Arabidopsis thaliana), 3'ss of exon 4
----ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
      ||   |  ||  || | |  | || | |  |   | | | ||  ||   | |   ||   || | ||  ||  |                |||  |||||||||| |||||||| ||||| || |||||||| |||||||||||||| ||| | || || ||||| |||||||| || ||| | ||||| ||||| ||
gtatgcaatccgttttccgctttcgcttttcgtg-ttctctcacgggatcaatgaaacgggttt--taatgtgtttgtaa----------------cattgcagGTATCATAAAGGGTACAATGACGACTACTCACTCTTACACCGGTGACCAGAGGTTGCTAGACGCGAGTCACCGTGATCTAAGGAGAGCAAGAGCAGCTGC

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: AT1G12900.2 (Arabidopsis thaliana), 3'ss of exon 4
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
             |    |    |||  |    || |  ||  | |     ||| | |      ||  | |      ||     ||  || |  ||  ||| ||||| |||||||| ||||| || |||||||| ||||| |||||||||||| |  | ||||||||||||||||| || ||| | ||||| ||||||||
------------gtaagcgtctcattgaaagtcaaatgttgctatgttgcaatcttgtaaaaatctgagtaatattgtgttgtgtgttaaact-tgttagGGATCATAAAGGGTACAATGACAACTACTCACTCATACACTGGTGACCAAAGGTTGTTAGATGCGAGCCACCGTGATCTAAGGAGAGCAAGAGCAGCAGC

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv01s0150g00500.t01 (Vitis vinifera), 3'ss of exon 4
-------ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
        | |||| | | ||  |  ||||  || |  |  ||  ||   |   | | |||||  |||  | |||| ||  ||||||      |      |||| ||| ||||| |||||||| ||||||||||||||||| ||||| || ||||| || ||| ||||||| |||||||| | ||| |||| ||   | || || | 
gtaattcatcaaatcattcatttactcaat--ttaaatcctata-atacaatatacaaatcatcatcttca-tatgaatatcaatggtgttccat-----atgatagGAATCATAAAGGGTACAATGACCACCACTCACTCTTACACTGGCGACCAGAGACTTTTTGATGCAAGCCACCGGGTCCTCAGGCCTGTGCGTGCTGCTGT

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv14s0068g00680.t01 (Vitis vinifera), 3'ss of exon 4
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
      | | || | ||| |    || |       | | ||| |  |     |    | |    || || |||  |  |||   | | ||| |||| |||| ||||||||||| |||||||| || ||||| |||||||| || ||||| ||||| ||||| || |||||||||||||| || ||||| || || |||||
-----gtaattt-tacatacccctttcgtc-----tgtttgtcaccatggtcttccctccatcgctttgaatg--atgggagcttaaaaattcatggcagGAATCATCAAGGGCACCATGACAACAACTCATTCCTACACTGGGGACCAGAGGCTCCTTGACGCCAGCCACCGTGACCTTAGACGTGCGAGAGCTGCAGC

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: EDP09609 (Chlamydomonas reinhardtii), 3'ss of exon 4
---------------------------------------------------------------------------------------ctaaaatgacttatg-catgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatg---catgccaatggaaaatgacaatccatga--cagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
                                                                                           | || | |  |  ||    | ||     || |  | | |        |  | |   || | |  |    | |||| |    |  ||      ||  |    || ||  ||||||| || ||||||||||| ||||||||||||||||||||  | || || || |||  |||||| ||||||                    
gtaaggaagcttacgcatgttgcttgctgtggctttttcgtcaggaataaatgcggggggcggcaagagcgtccacggtgttgcgggtccgagtgccctgggatatcttgtcttgtcagctcacctgtctctgacccggcccttcccctttcccctctcccttgcctaccccagGTGCTGGAGCAGAAGTTCGGCATTGTCAAGGGCACGATGACCACCACCCACTCCTACACCGGTGACCAGCGCCTGCTGGACGCGTCCCACCGCGACCTGC-------------------

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: PP1S11_397V6.2 (Physcomitrella patens), 3'ss of exon 3
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC-----------
||| ||  |||   | | || ||  ||   |     |  ||       |  | ||  | |  | ||      | ||| ||     ||| |   | |   || ||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||||   |||||||||| ||||| | ||  | || |||||           
ctataagcactc--ggacgctatcattagcaacgcctcgtgc------acaaccaactgccttgctcccttcgtcaa-ggtgttggacgag--aagttcggaatcatcaagGGAACCATGACCACTACCCACTCCTACACTGGTGACCAGAGGCTGCTCGATGCCTCCCACCGTGACTTGAGGAGAGCGCGTGCCGCAGCCCTGAACATTG

upper sequence: GLYMA19G28240.1 (Glycine max), 3'ss of exon 4
lower sequence: PP1S11_397V6.3 (Physcomitrella patens), 3'ss of exon 3
---------------------ctaaaatgact-tatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
                     | |  | |||| || |||  |      |   | ||              |  | ||  | |  | ||      | ||| ||     ||| |   | |   || ||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| || |||||   |||||||||| |||                   
caccttcgttgtgggtgtgaacgagcaggactataagcactcggacgctatcattagcaacgcctcgtgcacaaccaactgccttgctcccttcgtcaa-gGTGTTGGACGAG--AAGTTCGGAATCATCAAGGGAACCATGACCACTACCCACTCCTACACTGGTGACCAGAGGCTGCTCGATGCCTCCCACCGTGACTTGA-------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9205040|gb|BE331264.1|BE331264
EST:     CACCACTAACTGCCTTGCACGCTTTGTCAATGTCCTTGATCAGAAATGCG                         GTATCATGCAAGG-TACCATGACCAGCACTCACTTCTACA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCAT-CAAGGGTACCATGACCACCACTCACTCCTACA
EST: gi|22932679|gb|BU549818.1|BU549818
EST:     GTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: GTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16279244|gb|BI943334.1|BI943334
EST:     CACCACTAACTGCCTTGCACCCTGTGTCAATGTCCTTGATCAGAAATTCG                         GTATCATCAATGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|27423704|gb|CA935224.1|CA935224
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16343026|gb|BI968621.1|BI968621
EST:     CACCACTNACTGCCTNGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTNNNACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16279009|gb|BI943209.1|BI943209
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|209716985|gb|BW654388.1|BW654388
EST:     GATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: GATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16278791|gb|BI943097.1|BI943097
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAAGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16278224|gb|BI942792.1|BI942792
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|23732536|gb|BU764429.1|BU764429
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16284924|gb|BI946341.1|BI946341
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|17519373|gb|BM188415.1|BM188415
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGAC
EST: gi|209728330|gb|BW658542.1|BW658542
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGA
EST: gi|17519017|gb|BM188059.1|BM188059
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|209699080|gb|BW652873.1|BW652873
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGA
EST: gi|120534374|gb|EH262507.1|EH262507
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|17518543|gb|BM187585.1|BM187585
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACTTTTGTACCACCACTCACTCCTACACCGGTGACCA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTAC-CATG-ACCACCACTCACTCCTACACCGGTGACCA
EST: gi|15589817|gb|BI674433.1|BI674433
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16281806|gb|BI944679.1|BI944679
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16281753|gb|BI944650.1|BI944650
EST:     GTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAAGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: GTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16277799|gb|BI942568.1|BI942568
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120534293|gb|EH262426.1|EH262426
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120534097|gb|EH262230.1|EH262230
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16276606|gb|BI941947.1|BI941947
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTTG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCANA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16277060|gb|BI942183.1|BI942183
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|17400296|gb|BM177078.1|BM177078
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16277835|gb|BI942587.1|BI942587
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120534345|gb|EH262478.1|EH262478
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16342799|gb|BI968394.1|BI968394
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCANNNNACTCCTACACCGGTGACCAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCA-CTCACTCCTACACCGGTGACCAA
EST: gi|7924637|gb|AW830663.1|AW830663
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAAGTCCTTGATCAGAAATTCN                         GTATCATTAAGGGTACCATGACCACCACTCACTTCTAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTAC
EST: gi|16344991|gb|BI970586.1|BI970586
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTNNNACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|20812662|gb|BQ297140.1|BQ297140
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCCGGTGACCAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACC-GGTGACCAA
EST: gi|16277801|gb|BI942569.1|BI942569
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16278320|gb|BI942841.1|BI942841
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCTGTGACCANA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16283421|gb|BI945542.1|BI945542
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16284205|gb|BI945961.1|BI945961
EST:     CACCACTAACTGCCTTGCACCCTNTGTCAAGGTGCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120495645|gb|EH223812.1|EH223812
EST:     GTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: GTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|23064120|gb|BU578893.1|BU578893
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGATTTAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGA-CCAA
EST: gi|16278965|gb|BI943186.1|BI943186
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|15589943|gb|BI674559.1|BI674559
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|14205704|gb|BG839382.1|BG839382
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120495790|gb|EH223957.1|EH223957
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|5508885|gb|AI855443.1|AI855443
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAATGTACTTGATCAGAAATTCG                         GTATCATCAATGGTACCATGACCACCACTCACTACTACACCGTTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16277056|gb|BI942181.1|BI942181
EST:     CACCACTAACTGCCTTGCACCCTATGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAATGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|209717709|gb|BW654022.1|BW654022
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGG
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGG
EST: gi|23735324|gb|BU765937.1|BU765937
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|17518877|gb|BM187919.1|BM187919
EST:     AACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: AACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|209713044|gb|BW653751.1|BW653751
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGA
EST: gi|19346245|gb|BM891125.1|BM891125
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16281836|gb|BI944694.1|BI944694
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|209701889|gb|BW652287.1|BW652287
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCCAGGGTACCATGACCACCACTCACTCCTAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTAC
EST: gi|16279186|gb|BI943303.1|BI943303
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCN                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGNGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|9259639|gb|BE347786.1|BE347786
EST:     CACCACTAACTGCCTTGCACACTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAG
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAG
EST: gi|16283472|gb|BI945568.1|BI945568
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|209715726|gb|BW657414.1|BW657414
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|23059838|gb|BU578395.1|BU578395
EST:     TTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: TTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16279290|gb|BI943358.1|BI943358
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCT                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120534288|gb|EH262421.1|EH262421
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|19346096|gb|BM890976.1|BM890976
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|209702415|gb|BW656391.1|BW656391
EST:     CACCACTAACTGCCTTGCACCCTTTGTCA-GGTCCTTGATCAGAAAT-CG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAA
EST: gi|16276838|gb|BI942071.1|BI942071
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAAGTCCTTGATCAGAAATTCN                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCANA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCA-A
EST: gi|16277482|gb|BI942405.1|BI942405
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|15589869|gb|BI674485.1|BI674485
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16278197|gb|BI942778.1|BI942778
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16279739|gb|BI943591.1|BI943591
EST:     CCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16280002|gb|BI943728.1|BI943728
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|26047975|gb|CA784606.1|CA784606
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120530470|gb|EH258603.1|EH258603
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|17400644|gb|BM177426.1|BM177426
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|23732610|gb|BU764473.1|BU764473
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120531983|gb|EH260116.1|EH260116
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|151397828|gb|EV267701.1|EV267701
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAA-TTCG                         GTATCATCAAGG-TACCATGAC-ACCACTCACTCCT
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCT
EST: gi|209717710|gb|BW654023.1|BW654023
EST:     ACCACTAACTGCCTTGCACCCTTTGTCAAGGTCC-TGATCANGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAA
genomic: ACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCA-GAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAA
EST: gi|31560953|gb|CD486791.1|CD486791
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|120534016|gb|EH262149.1|EH262149
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|31474614|gb|CD416642.1|CD416642
EST:     TTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: TTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16281674|gb|BI944610.1|BI944610
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|23052871|gb|BU577362.1|BU577362
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|16283433|gb|BI945548.1|BI945548
EST:     GTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: GTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
EST: gi|15814783|gb|BI787058.1|BI787058
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC
      atcatatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ctaaaatgacttatgcatgcaatatttgagactaatttatgtgaagaaaagatcatattctctactatgcatgccaatggaaaatgacaatccatgacagGTATCATCAAGGGTACCATGACCACCACTCACTCCTACACCGGTGACCAAAGGCTTCTTGATGCGAGCCACCGTGACCTGAGGCGTGCAAGGGCAGCAGC

- - - - - - - gcatgca
- - - - - - - - - - - - - - - - - - - - - -aagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -catgcca