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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttaacctatattaatgttatgtggatgtttgcctagactcttggacataaaaatctcaagtttcttatttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACTAAGAAGTTAGAGCCCACACCTGGAGACATGATTCGCAATCCAAAGCTTG

Basic information

species Glycine max
transcript GLYMA17G04190.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA17G04190.1 (Glycine max), 3'ss of exon 4
lower sequence: LOC_Os03g20100.1 (Oryza sativa), 3'ss of exon 4
-----gttaacctatattaatgttatgtggatgtttgcctagactcttggacataaaa--atctcaagtttcttatttgtt--tagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACTAAGAAGTTAGAGCCCACACCTGGAGACATGATTCGCAATCCAAAGCTTG
      ||  | |   |   ||  |   | ||  |  |  |   |  | ||  |||    |    |  ||| |||  || |  ||||| |||||  ||||||||||||| || ||||| || || |||||||| ||||| ||| | ||||| |||||||| |||||||||||||||||||||||||
gtattttttgcattcgtacttgagaaaagtatactatctaaagtttatagagctaaggccagagtattttttttaaatgctattagGTTATGATTCTAAGCCATGACCGTGAAAGAGGCCGTGTTAGTCTTTCTACTAAAAAGCTTGAGCCGACACCTGGTGACATGATTCGCAATCCAAAGCTTG

upper sequence: GLYMA17G04190.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM5G862107_T01 (Zea mays), 3'ss of exon 4
gttaacctatattaatgttatgtggatgtt------tgcctagactcttggacataaaaatctcaagtttcttatttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACTAAGAAGTTAGAGCCCACACCTGGAGACATGATTCGCAATCCAAAGCTTG
       | |     || |   ||| ||||      |  | | |||    |     || | |      ||||  |   | ||||| |||||  | ||||||||||| || ||||| ||||| || ||||| ||||||||| | ||||| |||||||| |||||||| |||||||| |||||||
---gtattgtggctgtggttcttggttgttatgccatatccatacttaatggagctaacaccaatgaattctgttgcttatagGTTATGATACTGAGCCATGACCGTGAAAGAGGCCGAGTCAGCCTTTCTACTAAGAAGCTTGAGCCAACACCTGGTGACATGATCCGCAATCCCAAGCTTG

upper sequence: GLYMA17G04190.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv05s0077g00450.t01 (Vitis vinifera), 3'ss of exon 4
------------------gttaac-ctat-attaatgttatgtggatgtttgcc--tagactcttggacataaaaatctcaagtttcttatttgtt-tagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACTAAGAAGTTAGAGCCCACACCTGGAGACATGATTCGCAATCCAAAGCTTG
                  || ||  || | |  ||  || |     |   | |   || |    || |  ||   || |   || | |   ||| | ||||| |||||| | ||||| ||||| |||||||| || |||||||| || |||||||||||||| || || |||||||||||||||||||||||||||||||
gtttgcctataatatactgtcaatactgtcaccaaatttcttccactccctacagataaataaatgtatgtatttattttttgtgtttctcttgctgtagGTTATGATCCTGAGCCACGACCGTGAGAGAGGCCGTGTAAGTCTCTCAACTAAGAAGTTAGAACCTACCCCTGGAGACATGATTCGCAATCCAAAGCTTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7796894|gb|AW782288.1|AW782288
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|120492190|gb|EH220357.1|EH220357
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|7234235|gb|AW569574.1|AW569574
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31307118|gb|CD392321.1|CD392321
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31307953|gb|CD393156.1|CD393156
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31312418|gb|CD397621.1|CD397621
EST:     GACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCCCT
genomic: GACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31460197|gb|CD402165.1|CD402165
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31461540|gb|CD403568.1|CD403568
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|120496890|gb|EH225057.1|EH225057
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|13481318|gb|BG510661.1|BG510661
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31463323|gb|CD405351.1|CD405351
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|15199690|gb|BI423960.1|BI423960
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31312300|gb|CD397503.1|CD397503
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31462339|gb|CD404367.1|CD404367
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|15202941|gb|BI425709.1|BI425709
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCTTGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31469708|gb|CD411736.1|CD411736
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31460037|gb|CD402065.1|CD402065
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|11414052|gb|BF425992.1|BF425992
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31308252|gb|CD393455.1|CD393455
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31470914|gb|CD412942.1|CD412942
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31306284|gb|CD391487.1|CD391487
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31458368|gb|CD400396.1|CD400396
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31307868|gb|CD393071.1|CD393071
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31457183|gb|CD399211.1|CD399211
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|23732531|gb|BU764426.1|BU764426
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|10252976|gb|BE820742.1|BE820742
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|209699736|gb|BW655775.1|BW655775
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31309693|gb|CD394896.1|CD394896
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|120491477|gb|EH219644.1|EH219644
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31465686|gb|CD407714.1|CD407714
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|120497033|gb|EH225200.1|EH225200
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|120491890|gb|EH220057.1|EH220057
EST:     ACCGTGTAACTGATATTTCACCTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31561839|gb|CD487677.1|CD487677
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|7029450|gb|AW459233.1|AW459233
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|120492250|gb|EH220417.1|EH220417
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
EST: gi|31308426|gb|CD393629.1|CD393629
EST:     ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAG                         GTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT
genomic: ACCGTGTAACTGATATTTCAACTGTGCTTCAACCTGGTGACATATTAAAGgttaacctat ... atttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggatgtttgcctagactcttggacataaaaatctcaagtttcttatttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACTAAGAAGTTAGAGCCCACACCTGGAGACATGATTCGCAATCCAAAGCTTG
                                       tttcttatttgttt  CT-rich tract
                                       tttcttatttgttta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttaacctatattaatgttatgtggatgtttgcctagactcttggacataaaaatctcaagtttcttatttgtttagGTGATGATCTTAAGCCATGACCGAGAGAGAGGTCGAGTAAGTCTTTCCACTAAGAAGTTAGAGCCCACACCTGGAGACATGATTCGCAATCCAAAGCTTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA