Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC

Basic information

species Glycine max
transcript GLYMA16G04940.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: LOC_Os04g38600.2 (Oryza sativa), 3'ss of exon 3
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgccaatagaaactcacacaatccatga--cagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
            ||    |  |   |   |  |    | |         || ||| |||||      |   |  ||     || |  ||||| |||   |||| ||||||||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||||  | ||||| ||
-----------gtacgtgcgcacacgcgcgcatcagcgatcctcgaccaattttactctctctctctctctctgatg----cttaaccaatcaatggcgcagGCATCATCAAGGGGACGATGACCACCACCCACTCCTACACCGGCGACCAGAGGCTGCTCGACGCGAGCCACCGTGACCTCCGGCGCGCGCGTGCGGCGGC

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G162845_T01 (Zea mays), 3'ss of exon 3
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgc-----caatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
                   | |        ||  |      | ||  ||| |  || |   ||   ||||||     ||   |  ||   |||   ||||  |||| |||||||||||||||||||||||||| |||| ||||||| ||||||| ||||| || |||||||||||||| |||||| | |||||| | || || ||
------------------gtgagtgccttcttcgctcaaactcaaactcaaaccatacgtaacggcgcatgcatactcatccgtcaccgtcaccg-ccatcgcagGCATCATCAAGGGCACCATGACCACCACCCACTTCTACACCTGCGACCAGAGGCTGCTGGACGCGAGCCACCGCGACCTGCGCCGCGCCCGCGCCGCCGC

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G039723_T01 (Zea mays), 3'ss of exon 3
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgc-----caatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
                   |          ||  |      | ||  ||| |  || |   ||   ||||||     ||   |  ||   |||   |||   |||| |||||||||||||||||||||||||| |||| ||||||| ||||||| ||||| || |||||||||||||| |||||| | |||||| | || || ||
------------------gtgcgtgccttcttcgctcaaactcaaactcaaaccatacgtaacggcgcatgcatactcatccgtcaccgtcaccg-ccaccgcagGCATCATCAAGGGCACCATGACCACCACCCACTTCTACACCTGCGACCAGAGGCTGCTGGACGCGAGCCACCGCGACCTGCGCCGCGCCCGCGCCGCCGC

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM5G821433_T01 (Zea mays), 3'ss of exon 2
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgc-----caatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
                       |||   |  | | |   | |||  ||| |  || |   ||   ||||||     ||   |  ||   |||   |||   |||| |||||||||||||||||||||||||| |||| ||||||| |||| || ||||| || |||||||||||||| |||||| | |||||| | || || ||
-----------------------gtgcgtgccttcttcgctcaaac-tcaaaccatacgtaacggcgcatgcatactcatccgtcaccgtcaccg-ccaccgcagGCATCATCAAGGGCACCATGACCACCACCCACTTCTACACCTGCGATCAGAGGCTGCTGGACGCGAGCCACCGCGACCTGCGCCGCGCCCGCGCCGCCGC

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv01s0150g00500.t01 (Vitis vinifera), 3'ss of exon 4
ggaataca--atattagagactaaagtgaaggtttacatgttttaa-agatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
| ||| ||  | || |   | | |    |   |||| ||  | ||| | |  |||  | ||   | | | |||   ||||  || |          |||| ||| ||||| ||||| || ||||||||||||||||| ||||| |||||||| || ||| | || || |||||||| | ||| ||||  |   | || || | 
gtaattcatcaaatcattcatttactcaa---tttaaatcctataatacaatatacaaatcatca-tcttcatatgaatatcaa-tggtgttccatatgatagGAATCATAAAGGGTACAATGACCACCACTCACTCTTACACTGGCGACCAGAGACTTTTTGATGCAAGCCACCGGGTCCTCAGGCCTGTGCGTGCTGCTGT

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv14s0068g00680.t01 (Vitis vinifera), 3'ss of exon 4
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
       ||| ||| | ||     |    || |   |||    | | || |    | |    || || |||   || | | || | | ||| |||| |||| |||||||||||||||||||| || ||||| |||||||| || ||||| ||||| || ||||| |||||||||||||| || || || || || |||||
-----gtaattttacataccccttt---cgtctgtttgtcaccatggtc-ttccctccatcgctttgaatg---atgggagcttaaa-aattcatggcagGAATCATCAAGGGCACCATGACAACAACTCATTCCTACACTGGGGACCAGAGGCTCCTTGACGCCAGCCACCGTGACCTTAGACGTGCGAGAGCTGCAGC

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: EDP09609 (Chlamydomonas reinhardtii), 3'ss of exon 4
-----------------------------------------------------------------------------------------ggaatacaatattagagactaaagtgaaggtttacatgttttaaa---gatcatattattctctactatgcat-gccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
                                                                                          || | |  |   | |   |    ||   | | || ||| |   |   |  | |     | ||  || | | | ||| |    |  |     |    | |   || ||  |||||||||| ||||||||||| |||||||||||||| |||||  | || || ||||||  |||||| ||||||                    
gtaaggaagcttacgcatgttgcttgctgtggctttttcgtcaggaataaatgcggggggcggcaagagcgtccacggtgttgcgggtccgagtgccctgggatatcttgtcttgtcagctcacctgtctctgacccggcccttcccctttcccctctcccttgcctaccccagGTGCTGGAGCAGAAGTTCGGCATTGTCAAGGGCACGATGACCACCACCCACTCCTACACCGGTGACCAGCGCCTGCTGGACGCGTCCCACCGCGACCTGC-------------------

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: PP1S11_397V6.2 (Physcomitrella patens), 3'ss of exon 3
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC-----------
   |||     |  ||  |||   | |      ||   |  |  | | |  | |    |   |  | | |      |     |   || |   | |   || ||||||||||| ||||||||||| || ||||||||||| || ||||| ||||| ||||| ||   |||||||||| ||||| | ||  | || |||||           
-ctataagcactcggacgctatcattag---caacgcctcgtgcacaaccaactgccttgctcccttcgt-----caaggtgttggacgag--aagttcggaatcatcaagGGAACCATGACCACTACCCACTCCTACACTGGTGACCAGAGGCTGCTCGATGCCTCCCACCGTGACTTGAGGAGAGCGCGTGCCGCAGCCCTGAACATTG

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: PP1S11_397V6.3 (Physcomitrella patens), 3'ss of exon 3
-------------ggaatacaatattagagactaaagt----gaaggtttacatgttttaaagatcat--attattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
             ||  |  |  |  ||      |||     | | | |  |||     |    || |  |  |    || |  |||   |      ||  |     |    | |   || ||||||||||| ||||||||||| || ||||||||||| || ||||| ||||| ||||| ||   |||||||||| |||                   
caccttcgttgtgggtgtgaacgagcaggactataagcactcggacgctatcattagcaacgcctcgtgcacaaccaactgccttgctcccttcgtcaagGTGTTGGACGAGAAGTTCGGAATCATCAAGGGAACCATGACCACTACCCACTCCTACACTGGTGACCAGAGGCTGCTCGATGCCTCCCACCGTGACTTGA-------------------

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: EFJ29227 (Selaginella moellendorffii), 3'ss of exon 4
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
                                         |||    |     |  ||||     |   |    |||||||||   |||       |||| ||||||||||| |||||||| || || ||||| || ||||| |||||  | || |||||||| |||||||| |||||  | || ||  | || || ||
----------------------------------------gtaagttcctccaaaagctctctctcgatcgatgctagaaactcttgcaactt---ccagGGATCATCAAGGGAACCATGACAACAACACACTCGTATACCGGAGACCAGCGCCTGCTCGACGCCAGCCACCGGGACCTCCGCCGAGCTCGCGCCGCGGC

upper sequence: GLYMA16G04940.1 (Glycine max), 3'ss of exon 4
lower sequence: EFJ13677 (Selaginella moellendorffii), 3'ss of exon 4
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
                                         |||    |     |  ||||     |   |    |||||||||   |||       |||| ||||||||||| |||||||| || || ||||| |||||||| |||||  | || |||||||| |||||||| |||||  | || ||  | || || ||
----------------------------------------gtaagttcctccaaaagctctctctcgatcgatgctagaaactcttgcaactt---ccagGGATCATCAAGGGAACCATGACAACAACACACTCGTACACCGGAGACCAGCGCCTGCTCGACGCCAGCCACCGGGACCTCCGCCGAGCTCGCGCCGCGGC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|20075677|gb|BQ094460.1|BQ094460
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|8670362|gb|BE191469.1|BE191469
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTGCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCCGCGAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGAC
EST: gi|20812107|gb|BQ296585.1|BQ296585
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20449774|gb|BQ253898.1|BQ253898
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTAC
EST: gi|16282259|gb|BI944920.1|BI944920
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16278316|gb|BI942839.1|BI942839
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|209717363|gb|BW659053.1|BW659053
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|23057393|gb|BU578067.1|BU578067
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284847|gb|BI946302.1|BI946302
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCT                         GTATCATCAAGGGCACCATGACCACCACTCACTCGTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|14205728|gb|BG839406.1|BG839406
EST:     CKCCACTAACTGCCTTGCKCCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACKCCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20449056|gb|BQ253180.1|BQ253180
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|22525164|gb|BU083975.1|BU083975
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284251|gb|BI945984.1|BI945984
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|9204787|gb|BE331011.1|BE331011
EST:     CACCACTAACTGACTTGCACCCTTTGTCAATGTCCTTGATCAGAAATGCG                         GTATCATCAAG
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAG
EST: gi|20075628|gb|BQ094411.1|BQ094411
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16281798|gb|BI944675.1|BI944675
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20449074|gb|BQ253198.1|BQ253198
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284276|gb|BI945997.1|BI945997
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284866|gb|BI946312.1|BI946312
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16278983|gb|BI943195.1|BI943195
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGC
EST: gi|15662279|gb|BI699650.1|BI699650
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCAC
EST: gi|20207856|gb|BQ133945.1|BQ133945
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|19347081|gb|BM891961.1|BM891961
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCT                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|23052756|gb|BU577247.1|BU577247
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16279326|gb|BI943377.1|BI943377
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGATCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20448636|gb|BQ252760.1|BQ252760
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16282257|gb|BI944919.1|BI944919
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284186|gb|BI945951.1|BI945951
EST:     CACCACTAACTGCCTTGCACCCTGTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16283846|gb|BI945772.1|BI945772
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284884|gb|BI946321.1|BI946321
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20449733|gb|BQ253849.1|BQ253849
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAAAAATTCG                         GTATCATCCAAGG-CACCATGACCACCACTCACTCCTA-ACCCGGCGAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATC-AAGGGCACCATGACCACCACTCACTCCTACACC-GGCGAC
EST: gi|15589932|gb|BI674548.1|BI674548
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|22523320|gb|BU082131.1|BU082131
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|15662332|gb|BI699703.1|BI699703
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|15589918|gb|BI674534.1|BI674534
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|120493449|gb|EH221616.1|EH221616
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|9205214|gb|BE331438.1|BE331438
EST:     CACCACTAACTGCCTTGCACCCTNTGTCAAGGTCCTTGATCAGAAATTCN                         GTATCATCAAGGGCACCATGACCACC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACC
EST: gi|16279689|gb|BI943565.1|BI943565
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|208151799|gb|GD945586.1|GD945586
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284312|gb|BI946017.1|BI946017
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16278864|gb|BI943134.1|BI943134
EST:     CACCACTAACTGCCTTGCACCCTNTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16277769|gb|BI942553.1|BI942553
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16281847|gb|BI944700.1|BI944700
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|22523241|gb|BU082052.1|BU082052
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16277305|gb|BI942311.1|BI942311
EST:     CCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16282029|gb|BI944798.1|BI944798
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|42722754|gb|CK768653.1|CK768653
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20075751|gb|BQ094534.1|BQ094534
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284890|gb|BI946324.1|BI946324
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|17518493|gb|BM187535.1|BM187535
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16282296|gb|BI944939.1|BI944939
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20075390|gb|BQ094173.1|BQ094173
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTA
EST: gi|16284150|gb|BI945932.1|BI945932
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|15663342|gb|BI700713.1|BI700713
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16276763|gb|BI942031.1|BI942031
EST:     ACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGGAAAT-CG                         GTATCATCAAGGGCACCATGACCACCACTCACTTCTACACCCGCGACCAA
genomic: ACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAG-AAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAA
EST: gi|20075760|gb|BQ094543.1|BQ094543
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|17519676|gb|BM188718.1|BM188718
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16277755|gb|BI942546.1|BI942546
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAAAAATTCG                         GTATCATCAATGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|17964271|gb|BM271009.1|BM271009
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACC
EST: gi|20207916|gb|BQ134013.1|BQ134013
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20811756|gb|BQ296234.1|BQ296234
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20812137|gb|BQ296615.1|BQ296615
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16279033|gb|BI943222.1|BI943222
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16281551|gb|BI944546.1|BI944546
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCC                         GTATCATCAAGG
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGG
EST: gi|105633537|gb|DW246900.1|DW246900
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGG
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGG
EST: gi|16279390|gb|BI943411.1|BI943411
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20449676|gb|BQ253800.1|BQ253800
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16278408|gb|BI942889.1|BI942889
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|13125408|gb|BG315978.1|BG315978
EST:     CACCACTAACTGCCTTGCCCCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCCAAGGGC-CCATGACCACCACTCACTCCTTCACCGGGCGACCA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATC-AAGGGCACCATGACCACCACTCACTCCTACACCGG-CGACCA
EST: gi|16284811|gb|BI946283.1|BI946283
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|15664221|gb|BI701592.1|BI701592
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16279007|gb|BI943208.1|BI943208
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|120529763|gb|EH257897.1|EH257897
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16279418|gb|BI943425.1|BI943425
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16282288|gb|BI944935.1|BI944935
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|15284819|gb|BI468710.1|BI468710
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTAC
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTAC
EST: gi|16284191|gb|BI945954.1|BI945954
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|8670379|gb|BE191486.1|BE191486
EST:     ACCACTAACTGCCTTGCACGCCTTTG-CAAGGTGCTTGATCAGAAATTCG                         GTATCAATGA-GGGCACGATGAACAGCACTCACTCC
genomic: ACCACTAACTGCCTTGCAC-CCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCA-TCAAGGGCACCATGACCACCACTCACTCC
EST: gi|16284180|gb|BI945948.1|BI945948
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|13125387|gb|BG315957.1|BG315957
EST:     CACCACTAACTGGCTTGCACCCTGTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATTCAAGG-CACCATGACCACCACTCACTTCTACAGCGGCGACCA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCAT-CAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCA
EST: gi|16279776|gb|BI943611.1|BI943611
EST:     CCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|17518699|gb|BM187741.1|BM187741
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCATAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16279788|gb|BI943617.1|BI943617
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|27425176|gb|CA936696.1|CA936696
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20812124|gb|BQ296602.1|BQ296602
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16278958|gb|BI943182.1|BI943182
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|23052782|gb|BU577273.1|BU577273
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGNGACCAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAA
EST: gi|15589855|gb|BI674471.1|BI674471
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAAGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20207501|gb|BQ133590.1|BQ133590
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284872|gb|BI946315.1|BI946315
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284111|gb|BI945911.1|BI945911
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16279379|gb|BI943406.1|BI943406
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGATCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20207895|gb|BQ133984.1|BQ133984
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|15664291|gb|BI701662.1|BI701662
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284798|gb|BI946276.1|BI946276
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16281849|gb|BI944701.1|BI944701
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20448254|gb|BQ252378.1|BQ252378
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|17519775|gb|BM188817.1|BM188817
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAAGGCACCATGACCACCACTCACTCCTACACCGGAGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|15663336|gb|BI700707.1|BI700707
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16277081|gb|BI942194.1|BI942194
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAAGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCTGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|22540621|gb|BU090464.1|BU090464
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCT                         GTATCATCAAGGGCACCATGACCACCACTCACTTCCTACACCGGCGACCAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACT-CCTACACCGGCGACCAA
EST: gi|15589938|gb|BI674554.1|BI674554
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|20814854|gb|BQ299332.1|BQ299332
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
EST: gi|16284134|gb|BI945924.1|BI945924
EST:     CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCG                         GTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA
genomic: CACCACTAACTGCCTTGCACCCTTTGTCAAGGTCCTTGATCAGAAATTCGgtaatgtgcc ... tccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC
                                  aactcac  putative branch site (score: 2)
     tattattct  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ggaatacaatattagagactaaagtgaaggtttacatgttttaaagatcatattattctctactatgcatgccaatagaaactcacacaatccatgacagGTATCATCAAGGGCACCATGACCACCACTCACTCCTACACCGGCGACCAAAGGCTTCTCGACGCGAGCCACCGTGACCTGAGGCGCGCCAGGGCGGCAGC

- - - - - - - - - - - -gtgaagg
- - - - - - - - - - - - - - - - tacatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -catgcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacacaa