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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttggtaaataaatcttctctactcttgcctcaatatatgcaacattcacattttattttggaacttctgtcttttgttcccaacgtttttgtggacttaatttttataacttcttatcaaggaaagcataatataatataatgctacctaaagtatttttttttttcctttttgcagTTCTGTTGGGCAAGGTCTCGAGACAAGTAGTTATGTTGGGGAGATAATCTTTGCTATCTTAATTGCTGTCTTTGGATTGGTTCTATTTGCATCACTTATT

Basic information

species Glycine max
transcript GLYMA16G02850.1
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaagcataatataatataatgctacctaaagtatttttttttttcctttttgcagTTCTGTTGGGCAAGGTCTCGAGACAAGTAGTTATGTTGGGGAGATAATCTTTGCTATCTTAATTGCTGTCTTTGGATTGGTTCTATTTGCATCACTTATT
                       acctaaa  putative branch site (score: 3)
                               tatttttttttttcct  CT-rich tract
     ataatataatataatg  TA-rich tract