1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...ttgcttatttcttccccttttacttattcctttcctcccagttgcccacctgatagtggaaacaagcttaactttggttatttccttgaccgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAATAAAAAATCTGCACCTAAGCCTGCACCAAAACATGATATTCCAGAGAA
species | Glycine max |
transcript | GLYMA14G24450.1 |
intron # | 4 |
splice site | 3' |
intron type | U12 (go to U12 genes for details) |
EST: GAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|192298913|gb|FG987658.1|FG987658
genomic: GAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|192301050|gb|FG990120.1|FG990120
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|151403794|gb|EV273604.1|EV273604
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|207817966|gb|GD789815.1|GD789815
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|24135596|gb|BU926106.1|BU926106
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|23729172|gb|BU762672.1|BU762672
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|20448941|gb|BQ253065.1|BQ253065
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|192299073|gb|FG992849.1|FG992849
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|37995684|gb|CF807273.1|CF807273
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCANAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAEST: gi|16342156|gb|BI967751.1|BI967751
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|31465829|gb|CD407857.1|CD407857
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: GAGAAAGATCTTCTCAAAATCATGGCTGGAGCGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|298194401|gb|HO041049.1|HO041049
genomic: GAGAAAGATCTTCTCAAAATCATGGCTGGAG-GAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: GCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|208034450|gb|GD833814.1|GD833814
genomic: GCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGEST: gi|254337576|gb|GR849422.1|GR849422
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAG
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|254337575|gb|GR849421.1|GR849421
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|254348952|gb|GR860224.1|GR860224
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|16342161|gb|BI967756.1|BI967756
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|120493319|gb|EH221486.1|EH221486
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|151395288|gb|EV265159.1|EV265159
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|14126003|gb|BG790441.1|BG790441
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGNNNNNNNAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAEST: gi|58014523|gb|CX701265.1|CX701265
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
EST: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTG ATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
genomic: TGAGAAAGATCTTCTCAAAATCATGGCTGGAGGAACAGCGGACAATCTTGatatccttac ... cgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTA
ccacctgatagtggaaacaagcttaactttggttatttccttgaccgaaattcacATGTGGAAACAGCTGAGCAAGAAGAAGGGGATGAGAATGCCCGAGGTGCTAATAAAAAATCTGCACCTAAGCCTGCACCAAAACATGATATTCCAGAGAA
ttccttgac putative branch site
ttaacttt TA-rich tract