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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaggttttaaatacccagggcgctgtgattttttcctaaacagaaagaaatgttatatacttacatttgtcctttttttatgtcactacagTCCAGATTCACCACATTTGCAATCAGTTGTTTCCAACGCTGGACCTGGAAAGAGTAGTATCACACCTTTGGTTCGATGCACTCGTCATATGTGCCCAATC

Basic information

species Glycine max
transcript GLYMA13G06660.1
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taaacagaaagaaatgttatatacttacatttgtcctttttttatgtcactacagTCCAGATTCACCACATTTGCAATCAGTTGTTTCCAACGCTGGACCTGGAAAGAGTAGTATCACACCTTTGGTTCGATGCACTCGTCATATGTGCCCAATC
                     tacttac  putative branch site (score: 1)
                                 tcctttttttatgtc  putative PPT
           aaatgttatatactta  TA-rich tract