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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtggaatattcaagtcagtacctggcttcgttattgagagtttcttgctaatgagattgaatgcttttattgtagG

Basic information

species Glycine max
transcript GLYMA11G27200.1
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cctggcttcgttattgagagtttcttgctaatgagattgaatgcttttattgtagG
                         tgctaat  putative branch site (score: 2)
                                           cttttatt  putative PPT
                                            ttttattgta  TA-rich tract