Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacacatttagctacctccttttttacctttgaatgatcaaaacagagaactgaattctaattgtgaaactacattttcaatggtttttgctgatcttgctttgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAATGATCCCCGTGACCGCATTGAGATTGCCCAAAGCCATGTGTTTTATAGG

Basic information

species Glycine max
transcript GLYMA11G20840.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G20840.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv13s0158g00340.t01 (Vitis vinifera), 3'ss of exon 4
gtaacacatttagctacctccttttttacctt-tgaatgatcaaaacagagaactgaattctaattgtga-----aactacattttcaatggtttttgctgatcttgctttgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAATGATCCCCGTGACCGCATTGAGATTGCCCAAAGCCATGTGTTTTATAGG
       ||||   | | |||         || |||||   ||| |    ||       | | |   | |     || |||| | | |||| ||       |||        || ||||||||   | || | |||||||||||| ||||| |||||||| |||| ||||||||||| || || || ||||  || || |||| |||||  |||||||| 
-----gtatttgagttcttcccccacatttttgtgaatatacaagagcttgattcaccctttcacactaagggataattacagtctaaatgcttacaatctatccaa-----attttcagGGAGGCTTCATCACAGGCCATTCTTCAAGCACTAAGGGATCAGACCATGAATGATCCACGAGATCGGATTGCAATGGCACAAACCCATGCTTTTTATAGA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207715704|gb|GD699282.1|GD699282
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
EST: gi|193320990|gb|FK287715.1|FK287715
EST:     AGATGTTATACTAGTAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: AGATGTTATAC-AG-AATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208240518|gb|GE035988.1|GE035988
EST:     TCTGTCCCATCTTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: TCTGTCCCATC-TTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208275100|gb|GE069768.1|GE069768
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208043816|gb|GD841556.1|GD841556
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGATATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGG
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGG
EST: gi|208334902|gb|GE127051.1|GE127051
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGG
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGG
EST: gi|207808273|gb|GD779378.1|GD779378
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208100262|gb|GD898418.1|GD898418
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
EST: gi|207826449|gb|GD799504.1|GD799504
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193442845|gb|FK408801.1|FK408801
EST:     ATATTGATAATAA-                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: ATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193714616|gb|FK650679.1|FK650679
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
EST: gi|208237234|gb|GE033842.1|GE033842
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208189267|gb|GD986079.1|GD986079
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTAGAAGCATTAAGGGATGAGACAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAA
EST: gi|208298362|gb|GE094963.1|GE094963
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATT
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATT
EST: gi|208114601|gb|GD912548.1|GD912548
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208210445|gb|GE015622.1|GE015622
EST:     AGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: AGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208279071|gb|GE077534.1|GE077534
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAAGTATCCACGCCCACGGCC
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAA-TATCCA-GCCCA-GGCC
EST: gi|193308907|gb|FK276191.1|FK276191
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGG
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGG
EST: gi|193304998|gb|FK271811.1|FK271811
EST:     AGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: AGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193621977|gb|FK569213.1|FK569213
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208277356|gb|GE081195.1|GE081195
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193660711|gb|FK606435.1|FK606435
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208075555|gb|GD874316.1|GD874316
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193319640|gb|FK285147.1|FK285147
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGA
EST: gi|207690402|gb|GD672991.1|GD672991
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|207773530|gb|GD744556.1|GD744556
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
EST: gi|208034851|gb|GD836847.1|GD836847
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGA
EST: gi|207761931|gb|GD735058.1|GD735058
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGG
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGG
EST: gi|21595433|gb|BQ610478.1|BQ610478
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208246597|gb|GE046183.1|GE046183
EST:     TCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: TCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208078181|gb|GD877463.1|GD877463
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208028014|gb|GD822184.1|GD822184
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193711765|gb|FK647864.1|FK647864
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATT
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATT
EST: gi|207764277|gb|GD735306.1|GD735306
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCC
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCC
EST: gi|193625356|gb|FK575202.1|FK575202
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193633217|gb|FK578813.1|FK578813
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208261153|gb|GE058607.1|GE058607
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193425173|gb|FK389902.1|FK389902
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193427265|gb|FK393473.1|FK393473
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193301971|gb|FK266512.1|FK266512
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|254338244|gb|GR849769.1|GR849769
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208235431|gb|GE034657.1|GE034657
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208205363|gb|GE004094.1|GE004094
EST:     AGCTCTGTCCCTATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: AGCTCTGTCCC-ATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208305183|gb|GE105278.1|GE105278
EST:     AGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: AGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193699509|gb|FK638522.1|FK638522
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208246104|gb|GE045718.1|GE045718
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|193479522|gb|FK448101.1|FK448101
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAA
EST: gi|208326022|gb|GE121930.1|GE121930
EST:     GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAG                         GGAATATCCAGCCCAGGCC
genomic: GTGGAGCTCTGTCCCATCTTGAAGATGTTATACAGAATATTGATAATAAGgtaacacatt ... tgatcttcagGGAATATCCAGCCCAGGCC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctaattgtgaaactacattttcaatggtttttgctgatcttgctttgatcttcagGGAATATCCAGCCCAGGCCATTCTTGAAGCATTAAGGGATGAGACAATGAATGATCCCCGTGACCGCATTGAGATTGCCCAAAGCCATGTGTTTTATAGG
                                     tcttgcttt  CT-rich tract
                attttcaat  TA-rich tract