1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...atttggcatttaaactgtaatcctaaataattgctgaagaccattgattgtaggggaaaaaaaaggtgttattccttatataaaactctacgttatgcagGCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTCTATCAAAAATTCACTTCACTTTGGGATGAGCACAAAAATGGTGCTGGTG
species | Glycine max |
transcript | GLYMA10G40730.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAA GCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTCEST: gi|22928588|gb|BU545727.1|BU545727
genomic: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAAgtaggtcccc ... cgttatgcagGCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTC
EST: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAA GCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTCEST: gi|10846334|gb|BF069252.1|BF069252
genomic: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAAgtaggtcccc ... cgttatgcagGCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTC
EST: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAA GCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTCEST: gi|27423492|gb|CA935012.1|CA935012
genomic: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAAgtaggtcccc ... cgttatgcagGCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTC
EST: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAA GCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTC
genomic: TGGCTTTCTTTGCTCAAGATGGGCATGCTGATCAAGCAAATGATCGAAAAgtaggtcccc ... cgttatgcagGCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTC
gattgtaggggaaaaaaaaggtgttattccttatataaaactctacgttatgcagGCCTATAAGGAGTGGATTCTTAAGACAATCGAAGACAGTTGGAATCTTTTCTATCAAAAATTCACTTCACTTTGGGATGAGCACAAAAATGGTGCTGGTG
cattgat putative branch site (score: 4)
ttattccttatataaa TA-rich tract