1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tgtatagatatatatttactataatcatcattcggagcctcaattttaactgctctttttgctttcaaatatatgtatctgaatctacgatgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAAGCAGAGTTTGCCAAGTCCCAAAAATCACAAGGGAAAGGAAATGTTTCG
species | Glycine max |
transcript | GLYMA10G07680.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|6848156|gb|AW350446.1|AW350446
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209729426|gb|BW663687.1|BW663687
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|213610359|gb|DB976761.1|DB976761
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|298178215|gb|HO023950.1|HO023950
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|192311451|gb|FK005182.1|FK005182
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|298184907|gb|HO030120.1|HO030120
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254338509|gb|GR849927.1|GR849927
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209725927|gb|BW654752.1|BW654752
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|298170088|gb|HO018712.1|HO018712
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209717027|gb|BW682315.1|BW682315
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254338510|gb|GR849928.1|GR849928
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|31472739|gb|CD414767.1|CD414767
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209725928|gb|BW654753.1|BW654753
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254330682|gb|GR841947.1|GR841947
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254326104|gb|GR840696.1|GR840696
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|298174457|gb|HO014602.1|HO014602
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|21594271|gb|BQ610109.1|BQ610109
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|308097945|gb|HO761116.1|HO761116
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254319112|gb|GR828840.1|GR828840
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|213612145|gb|DB976806.1|DB976806
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|58015011|gb|CX701753.1|CX701753
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254327330|gb|GR836939.1|GR836939
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209712106|gb|BW676723.1|BW676723
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|38193719|gb|CF922925.1|CF922925
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|208061423|gb|GD860117.1|GD860117
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|298191792|gb|HO035874.1|HO035874
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|57574313|gb|CX547288.1|CX547288
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254331670|gb|GR846087.1|GR846087
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|192327707|gb|FK020698.1|FK020698
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|151409976|gb|EV279784.1|EV279784
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|193658045|gb|FK601988.1|FK601988
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|193682903|gb|FK625051.1|FK625051
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|38192454|gb|CF921660.1|CF921660
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209717026|gb|BW682314.1|BW682314
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|213616688|gb|DB971227.1|DB971227
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|19452701|gb|BM954111.1|BM954111
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|254330683|gb|GR841948.1|GR841948
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|151411689|gb|EV281500.1|EV281500
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|13791093|gb|BG653684.1|BG653684
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|41146259|gb|CK606470.1|CK606470
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|193562311|gb|FK517330.1|FK517330
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAAGAEST: gi|9203421|gb|BE329574.1|BE329574
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAA-GA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAGATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|17400652|gb|BM177434.1|BM177434
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|10709290|gb|BF009014.1|BF009014
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|193634766|gb|FK583911.1|FK583911
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|120532385|gb|EH260518.1|EH260518
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|192311450|gb|FK005181.1|FK005181
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209729425|gb|BW663686.1|BW663686
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209713440|gb|BW681481.1|BW681481
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|9986848|gb|BE660956.1|BE660956
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|41145786|gb|CK605997.1|CK605997
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|4396328|gb|AI495325.1|AI495325
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209713439|gb|BW681480.1|BW681480
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|209712105|gb|BW676722.1|BW676722
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|11414163|gb|BF426174.1|BF426174
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|213603022|gb|DB958593.1|DB958593
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|23732092|gb|BU764201.1|BU764201
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|298179313|gb|HO027784.1|HO027784
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|7042350|gb|AW472244.1|AW472244
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|213607624|gb|DB958643.1|DB958643
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|58025017|gb|CX711758.1|CX711758
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|120532494|gb|EH260627.1|EH260627
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|208084891|gb|GD881089.1|GD881089
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|26267866|gb|CA818929.1|CA818929
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAEST: gi|298187108|gb|HO034257.1|HO034257
genomic: AGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
EST: AGAGCTGGGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCG TGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
genomic: AGAGCTGAGAAGCCAGAAGTTCGAGATGCAAATAGGGAAGCTGCCCTTCGgtgtgttttt ... tgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAA
ttaactgctctttttgctttcaaatatatgtatctgaatctacgatgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAAGCAGAGTTTGCCAAGTCCCAAAAATCACAAGGGAAAGGAAATGTTTCG
ttttaac putative branch site (score: 2)
tttcaaatatatgtat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgtatagatatatatttactataatcatcattcggagcctcaattttaactgctctttttgctttcaaatatatgtatctgaatctacgatgtgatgcagTGAAATTAAGGAGAGGAACAAGAAAACAAAGGATGAGAAGAAGGCTAAGAAAGCAGAGTTTGCCAAGTCCCAAAAATCACAAGGGAAAGGAAATGTTTCG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtatctg