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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtctgtatttctgtacaaattctatcagatatttctgtctagttaagtttctagatgctaaataaatgtgtttgttttcccatgttccagAGACTTGATTGGCAATTACAGAAAATCTGTGGAGGATCTTGTTAGGTCTGAGCCAGTAGAGAATGTTGTGCTTTAGATAGGTAGGCACCCTTAAATGGGG

Basic information

species Glycine max
transcript GLYMA08G20540.1
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtctagttaagtttctagatgctaaataaatgtgtttgttttcccatgttccagAGACTTGATTGGCAATTACAGAAAATCTGTGGAGGATCTTGTTAGGTCTGAGCCAGTAGAGAATGTTGTGCTTTAGATAGGTAGGCACCCTTAAATGGGG
                    tgctaaa  putative branch site (score: 2)
                                       ttttcccatgttcc  putative PPT
                       taaataaatgtgttt  TA-rich tract