1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...agcatatttatcttgttcagtgttactttttgatgtttatatttttatgcgagtgttcttctgttcttctggaagattcatctaccatgttgtgttctagGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTACG
species | Glycine max |
transcript | GLYMA06G18080.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GGCGGGGTACATGATGG GTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATTACATAAAEST: gi|193423092|gb|FK389319.1|FK389319
genomic: GGCGGGGTACATGATGGgtagctatca ... tgtgttctagGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAA
EST: GGCGGGGTACATGATGG GTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAAEST: gi|208322402|gb|GE122583.1|GE122583
genomic: GGCGGGGTACATGATGGgtagctatca ... tgtgttctagGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAA
EST: GGCGGGGTACATGATGG GTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAA
genomic: GGCGGGGTACATGATGGgtagctatca ... tgtgttctagGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| agcatatttatcttgttcagtgttactttttgatgtttatatttttatgcgagtgttcttctgttcttctggaagattcatctaccatgttgtgttctagGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTACG
- - - - - - - -ttcagtg
- - - - - - - - - - - - - - - tgatgtt
- - - - - - - - - - - - - - - - - - - - - -tttatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -accatgt