Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG

Basic information

species Glycine max
transcript GLYMA05G31450.4
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: LOC_Os10g22450.1 (Oryza sativa), 3'ss of exon 7
-------gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
         ||| |     |       ||| |    | ||  | |    |      | | ||||||  | |||  |     |  ||  |  || ||||||||  | || || || ||||||||||||||||||||||| |||||||| || ||||| |||||||| || |||||||| || ||| |||||||||| || |
ctccgatagaatctgccagaccgaaaaattataccccgctgatgcacggtggctgatgatttggttgctgtttctattgagtaattgttaattgttgcagTATATTCCATACGTTGGGGACAGCAAGAGGGCCATGGACGAGTACACCTCGGAGATCTTCATGGGAGGGAAGAACACCATCGTGCTGCACAACACCTGCG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: LOC_Os03g09250.2 (Oryza sativa), 3'ss of exon 7
gtaattttt--tttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttat-tgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
    |||    ||| |   |  ||| ||   ||  | |    | || |||   || |   | ||   || | ||||     | | |  || ||||||| ||||| ||||| || |||||||||||||| ||||| |||||||| || ||||| |||||||| || |||| ||| || ||  |||||||||| ||||
---gtttgcaatttgtccatggattcttctgcagcagtatgccattaaaaaaaaacttagttttggattaaaacttgtccatgtattcttctgcagTATGTGCCGTATGTTGGAGACAGCAAGAGGGCAATGGACGAGTACACCTCAGAGATCTTCATGGGGGGTAAGAGCACCATCGTTCTGCACAACACCTGTG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G155242_T01 (Zea mays), 3'ss of exon 7
gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
         | | ||   | || |||   | |         |  || || |||       ||   |||| ||||     | || || |||||||| ||||| || || || |||||||||||||| ||||| |||||||| || ||||| |||||||| || |||||||| || ||| |||||||||| ||||
--------gtctgttagctgatctttcacctcgttaaaagttgacatatgcaaggcagatttacattgaaacttgtcactctt-ttgttgcagTATGTGCCGTACGTGGGAGACAGCAAGAGGGCTATGGACGAGTACACCTCAGAGATCTTCATGGGCGGCAAGAACACCATCGTGCTGCACAACACCTGTG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G392513_T02 (Zea mays), 3'ss of exon 5
gtaattttttttatttttttatttttagtcactactccctctttca--aattcaattggttattt-ttttgacactt--tggtttattgtttt-tgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
||  | ||   || | ||  |  | |    |   ||  | | | ||  | || ||  |   ||||   || | ||||     |   ||| |   ||||||| ||||| || || || ||||| |||||||| ||||| |||||||| || ||||| ||||||||||| |||||||| || ||| |||||||||| ||||
gtc-tattagctaatcttccacctctttaaaaagctggcacatgcagcagtttaaacgtagatttacattaaaacttgccactcctttgctgcatgcagTATGTGCCGTACGTGGGAGACAGTAAGAGGGCTATGGACGAGTACACATCAGAGATCTTCATGGGTGGCAAGAACACCATCGTGCTGCACAACACCTGTG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G071174_T01 (Zea mays), 3'ss of exon 2
gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactt-tggtttattgtt----tttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
             |   |   |    | |  ||| |     ||   | |     || || ||  |   |   |  ||  | ||   |    |||||||||| | || || || || |||||||||||||| ||||| ||||| || |||||||| ||||||||||| |||||||| || | | |||||||||| || |
------------gtgggtcggtcgacactagctagttgtgtttgtgactgatgctgcttcttgctcaaaggttgatgaatcatccctatattttgcagTACATCCCCTACGTGGGTGACAGCAAGAGGGCTATGGACGAGTATACCTCTGAGATCTTCATGGGTGGCAAGAACACCATCGCGCTGCACAACACCTGCG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G177461_T01 (Zea mays), 3'ss of exon 7
----------gtaatt-ttttttatttttttatt---tttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
            | || || |||| ||| | | |   | ||  |  ||    ||  ||||  ||  |||  || ||  |   | | ||        |  ||||||||||| | || ||||| || ||||||||||| |||||||| || || || || ||||| |||||||| || |||||||| || ||| |||||||||| ||||
gtcggtcggtccacttgttgtttagtttgtgactgagtctatcccatatatgctacttcatgtttgattaattgttactc--aaagttgatccctcttcttttgcagTACATCCCCTATGTGGGTGACAGCAAGAGAGCCATGGACGAATATACCTCCGAGATCTTCATGGGCGGCAAGAACACCATCGTGCTGCACAACACCTGTG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: AT5G10170.1 (Arabidopsis thaliana), 3'ss of exon 7
gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
      |  || |||||  ||||  |  | | ||  |  |||  |||||   |||    |  |   | | |||    ||   || | |||||||| ||||| | |||||| ||||||||||| || |||||||| ||||| || |||||||||||||| || |||||||| |||||| |||||||||| ||||
-----gtgattaattttactattaattataattatccaatctaacaaatcacatta---acataaattatact---attggatggtgttgcagTATGTGCCATGTGTAGGAGACAGCAAGAGAGCAATGGATGAATACACATCAGAGATATTCATGGGAGGGAAGAACACGATTGTGATGCACAACACTTGTG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: AT2G22240.1 (Arabidopsis thaliana), 3'ss of exon 5
gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatt----tttttgacact----ttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
    ||  ||||   |          ||| |  | | |||| ||    || || |   | ||    | ||  |  ||    ||| | |     |||||||||| ||||| ||||| | ||| || || || || |||||||||||||| ||||||||||||||||| || | |||||| || |||||||| ||||| ||||
--gtttgattttgaatcagaggccagagtgatcaattcctcctttctttttaagtacattttaaagtcttaaatcctgctattgttctgaatgttttgcagTATGTGCCATATGTTGCGGATAGTAAAAGAGCAATGGATGAGTACACGTCTGAGATATTCATGGGAGGGAGGAACACTATAGTGTTGCATAACACTTGTG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: AT4G39800.1 (Arabidopsis thaliana), 3'ss of exon 7
gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacact-ttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
|||| |      |       |     | |||  ||    |  |       ||||  |  ||    ||||  |  || || | ||  ||||| |||| || || ||||| | ||| || ||| | |||||||| |||||||| || |||||||||||||| || ||||||||||||||| ||||||| || || |
gtaaatag----agaaccggacagacactcaaaacctgtttctgttgg--caatctgagatcccattgatccaatttgtgtgtttgttttgtagTATGTACCGTATGTTGCGGATAGTAAGCGAGCCATGGACGAGTACACATCAGAGATATTCATGGGAGGGAAGAACACAATTGTGATGCACAATACCTGCG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: Vv07s0031g00920.t01 (Vitis vinifera), 3'ss of exon 7
---------gtaattttttttatttttttatttttagtcact-actccctctttcaaattcaattggttattttt-ttgacacttt--ggt-ttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
           ||   |  || | ||| ||| | |    | | |    ||  ||   | ||| |   |     |   | ||| | |  ||| || ||| | |||||||| ||||| ||||| || || |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| || |
gtatatcgcagaaccctccttttgtttgtatgtattacaattcagatgctggtttggactcattcattctcactggctaacattatacggtgttgttgatattgcagTATGTGCCATATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGGAAGAGCACCATTGTGCTGCACAACACCTGCG

upper sequence: GLYMA05G31450.4 (Glycine max), 3'ss of exon 4
lower sequence: PP1S55_204V6.1 (Physcomitrella patens), 3'ss of exon 6
------------------------------------------gtaatttt--ttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
                                          |  ||||    |||  |||   | |   |||       |  ||   |  ||||       |   | ||   ||   |   | |  |  | |||||||||| |||||||| || |||||||||||||| ||||| ||||||||||| ||||| |||||||| |||   |||||||| ||  ||||||| || || |
gtattcttatctctactccagccctgcagtcaatgttttcaagccatttcggctttgatttcagactccaagttgtc-tgcattcacaccgattctcgaatcttcctcttaaccaaaatcaatgacggcgtctgcagTACGTCCCTTATGTGGGTGACAGCAAGAGGGCAATGGACGAGTACACTTCGGAGATCTTCATGGGCGGACGTAACACAATCGTCATGCACAATACGTGCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10847107|gb|BF069873.1|BF069873
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193524006|gb|FK481051.1|FK481051
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTA
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTA
EST: gi|193456225|gb|FK423041.1|FK423041
EST:     CCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|208272715|gb|GE066221.1|GE066221
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
EST: gi|22525838|gb|BU084649.1|BU084649
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193531203|gb|FK486268.1|FK486268
EST:     CCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|22525230|gb|BU084041.1|BU084041
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGAT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGAT
EST: gi|193637695|gb|FK583542.1|FK583542
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|10231931|gb|BE800819.1|BE800819
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|15285788|gb|BI469679.1|BI469679
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|27424631|gb|CA936151.1|CA936151
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|22931708|gb|BU548847.1|BU548847
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|7283317|gb|AW595925.1|AW595925
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|22933777|gb|BU550916.1|BU550916
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193665341|gb|FK608011.1|FK608011
EST:     TCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: TCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|10231949|gb|BE800837.1|BE800837
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|192301389|gb|FG994713.1|FG994713
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTTT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193677782|gb|FK614952.1|FK614952
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|15664440|gb|BI701811.1|BI701811
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|20448537|gb|BQ252661.1|BQ252661
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|10231153|gb|BE800100.1|BE800100
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193485468|gb|FK452551.1|FK452551
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAG
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAG
EST: gi|9259990|gb|BE348137.1|BE348137
EST:     CATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCAATTA-G                         TACCTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTTCACTTT
genomic: CATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCA-TTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTC
EST: gi|192305229|gb|FG997523.1|FG997523
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTGGGGGACAGCAAGAGGGCCATGGACGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|5677640|gb|AI938770.1|AI938770
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|17021564|gb|BM092598.1|BM092598
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|208241625|gb|GE038285.1|GE038285
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|120492376|gb|EH220543.1|EH220543
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|10234429|gb|BE803317.1|BE803317
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGATTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|10253117|gb|BE820883.1|BE820883
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|9204546|gb|BE330770.1|BE330770
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTATGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|8669934|gb|BE191041.1|BE191041
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|6718757|gb|AW306404.1|AW306404
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|208317783|gb|GE114940.1|GE114940
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|12688968|gb|BG155304.1|BG155304
EST:     CCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|120529467|gb|EH257601.1|EH257601
EST:     CCATCCTCTATGAGCCCGGTGTACATCCAGACCATGTGCTTGTCATTAAG                         TACGGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTC
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTAC-GTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTC
EST: gi|208290678|gb|GE082350.1|GE082350
EST:     CCNTCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
EST: gi|17964415|gb|BM271150.1|BM271150
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|120492865|gb|EH221032.1|EH221032
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|207788327|gb|GD762139.1|GD762139
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193517282|gb|FK476505.1|FK476505
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|15285651|gb|BI469542.1|BI469542
EST:     CCTTCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193404431|gb|FK365340.1|FK365340
EST:     GAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: GAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193403549|gb|FK366919.1|FK366919
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGG-ACAG
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAG
EST: gi|207771562|gb|GD742953.1|GD742953
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193530412|gb|FK486611.1|FK486611
EST:     CCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|192301388|gb|FG994712.1|FG994712
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|20812941|gb|BQ297419.1|BQ297419
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|12688397|gb|BG154733.1|BG154733
EST:     TCCTCTATGAGNCCCGGTGAACATNCCAGACCATGTGGNTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: TCCTCTATGAG-CCCGGTGAACAT-CCAGACCATGTGG-TTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|15287101|gb|BI470992.1|BI470992
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|15200236|gb|BI424244.1|BI424244
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|120493361|gb|EH221528.1|EH221528
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|207783762|gb|GD756000.1|GD756000
EST:     CCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|9986213|gb|BE660321.1|BE660321
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|15203303|gb|BI426071.1|BI426071
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193396085|gb|FK361840.1|FK361840
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
EST: gi|9204909|gb|BE331133.1|BE331133
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|208216053|gb|GE008961.1|GE008961
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGA
EST: gi|207692020|gb|GD673937.1|GD673937
EST:     AACATCCAGACCATGTGGTTGTCATTTAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: AACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|10232271|gb|BE801159.1|BE801159
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|208313222|gb|GE110920.1|GE110920
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|208247303|gb|GE048947.1|GE048947
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|22522672|gb|BU081483.1|BU081483
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|8670153|gb|BE191260.1|BE191260
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAGGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|10231165|gb|BE800112.1|BE800112
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|151406372|gb|EV276187.1|EV276187
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|13312611|gb|BG406262.1|BG406262
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|12688896|gb|BG155232.1|BG155232
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|192300396|gb|FG987883.1|FG987883
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|27425475|gb|CA936995.1|CA936995
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|14008873|gb|BG725477.1|BG725477
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193319266|gb|FK285430.1|FK285430
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|15203180|gb|BI425948.1|BI425948
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|193710133|gb|FK642831.1|FK642831
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|120496079|gb|EH224246.1|EH224246
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGNTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|20498701|gb|BQ273631.1|BQ273631
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|6913694|gb|AW395224.1|AW395224
EST:     CCATCCTCTATGAGCCCGGTGAACATGCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|26269143|gb|CA820206.1|CA820206
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|207833383|gb|GD804514.1|GD804514
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATG
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATG
EST: gi|27425861|gb|CA937381.1|CA937381
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|120495212|gb|EH223379.1|EH223379
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
EST: gi|120495709|gb|EH223876.1|EH223876
EST:     CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAG                         TACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT
genomic: CCATCCTCTATGAGCCCGGTGAACATCCAGACCATGTGGTTGTCATTAAGgtaatttttt ... gtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG
                         ttttgac  putative branch site (score: 3)
                                           ttgttttt  putative PPT
       aaattcaattggttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaattttttttatttttttatttttagtcactactccctctttcaaattcaattggttatttttttgacactttggtttattgtttttgcagTACGTGCCTTATGTAGGGGACAGCAAGAGGGCCATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGTTGCACAACACATGTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC