1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...ttttaaccccttattgtagtgtatatatttcttcattacttgtttctgttcattcaatctgcagtactcattggtgacattttctattttatttattcagAACCTTGCTGCTGACTACAATCCCCGTCTTGATAGTATCACTTCTCATATTAGTAATAGGGAGTCTTGTGGAATTGGACAGTACTATAAATGCTTTTATC
species | Glycine max |
transcript | GLYMA02G48150.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
ctgttcattcaatctgcagtactcattggtgacattttctattttatttattcagAACCTTGCTGCTGACTACAATCCCCGTCTTGATAGTATCACTTCTCATATTAGTAATAGGGAGTCTTGTGGAATTGGACAGTACTATAAATGCTTTTATC
ttttctattttattt CT-rich tract
tgacattttctatttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttttaaccccttattgtagtgtatatatttcttcattacttgtttctgttcattcaatctgcagtactcattggtgacattttctattttatttattcagAACCTTGCTGCTGACTACAATCCCCGTCTTGATAGTATCACTTCTCATATTAGTAATAGGGAGTCTTGTGGAATTGGACAGTACTATAAATGCTTTTATC
- - -acccctt
- - - - - - - tgtagtg
- - - - - - - - - - - - - - - cttcatt
- - - - - - - - - - - - - - - - - - - - -gtttctg
- - - - - - - - - - - - - - - - - - - - - - - - - cattcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -tctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tggtgac